GBrowse Details

Vigan.10G004700.01

Basic Information:
Name: Vigan.10G004700.01
Multiple alignment
Variant Information
Position: Chr10:431390..434629 (- strand)
Length: 3240
Functional Information:
Description: Similar to Uncharacterized protein. [I1L797, Glycine max]
GO: Cellular Component: membrane (GO:0016020)
InterPro: Drug/metabolite transporter (IPR000620)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,0.00,0.00,0.02,0.00,0.12,1.31
Automatic updates:
Name: NM_001370930 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max WAT1-related protein At3g30340-like (LOC100794199), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:431390..431661 (- strand)
Length: 272
Type: three_prime_UTR
Position: Chr10:431662..431884 (- strand)
Length: 223
Type: CDS
Position: Chr10:431986..432137 (- strand)
Length: 152
Type: CDS
Position: Chr10:432555..432957 (- strand)
Length: 403
Type: CDS
Position: Chr10:433215..433331 (- strand)
Length: 117
Type: CDS
Position: Chr10:433675..433731 (- strand)
Length: 57
Type: CDS
Position: Chr10:434440..434606 (- strand)
Length: 167
Type: CDS
Position: Chr10:434607..434629 (- strand)
Length: 23
Type: five_prime_UTR


>Vigan.10G004700.01
TTAAGAGAGT AAAAGAAGCA AAAATGATGA AGGCTGTTTT GGTGATGATT ATTGTTAACC TAGCTTTGGC TTTTGTCAAT
ATATTTCTTA AGAAAGTGCT TAATGAAGGA ATGGATTACT TCACCATCTT AACATACCGA CAAGCTATTT CAGCCATTTT
CTTAGCACCT ATTGCTTGCT TCTATGAAAG GGAAAGGAAG CTGGAGGGTC ACATAATATG TCTGCTTTTC ATAAGTGCTC
TTGTCGGGGT TACCTTTACA CAATACCTGT TTCTTATGGG ACTGGAATAT ACATCTGCAA CTTTCTCATG TGCATTTCTA
AATATGGTGC CTGTATTTAC CTTTATCATG GCACTGCCAC TCGGGATAGA GAAGGTAAAC ATGAGAAAAG TGAGTGCTAA
GGCTAAGGTT TTGGGAACTT TTGTGTGTAT TGGTGGAGCT TTGATGTTGA TCCTTTACAA AGGAATGCCC TTAATCAAGC
AAGAACAAGA TCACATTGCA GACAAAGGCA CAACAACAGC ATCAGCTTCC AATATAAAGA AATGGATAAT AGGTTCACTG
CTTCTGACTG CAGGATGTGG CTTGTGGTCT TCATGGTTTC TCATACAAGC AAGGATTAGC AGAAAGTATC CATGTCAATA
CTCTAGCACA GCCCTTTTGT CCTTTTTTGC TGCCATTCAA TCAGCAATTT TAACTTTGCT CATTGACAGA AGTAAGACCA
AATGGATTCT CAGAGGAAAG TTAGAGATTC TCACTGTTGT ATATTCTGGA CTGGTTGGAT CAGGGTTGTG CTATGTGGCA
ATGTCATGGT GTGTGAAACA AAGGGGTCCA GTTTTCACTT CAGCATTCAC CCCTCTTCTG CAGATGTTTG TGGCAGTGCT
TGATTTCTCT ATATTACAAG AGGAGATTTA TTTGGGAAGT GTTGCAGGAT CAGTGTTGGT TATTTCTGGC ACTTATATTT
TACTTTGGGG TAAAAGTAAA GAGGAAGAAC AAAATGCCAT GAAGGATAGT CAAGAAGATG AAGAATGTAT CAACAATTTT
GAGGACAATC CAAATGTAGC CTCTAAGCTA AGGCTTAAAG GGGAACAAGG ATTATCTGAA GTACAAGTGA AGCAGTTGGC
CATTGAAGTA ACTAGAAGCT GATAAAATTC TCAAGAATTT CATGCGGGAG AGAATGTTTA GAAGTTTAGC TTCAGTACCA
ATTTTTCAAT TACTCTTGTG TGCATAATGG CAAAGCTTTC ATATGCATTC ATGTAATGTA CTGGTTGATT TGCACATGTA
AAACCTAACT TGTAATTTCA CGGTTATAGA TATTTTATGA ATATTCACTT AGCGTAGTCG TTAAAAGTCT CACGTCACCA
TAAGTAAGTG TACTTACAAG CTAATTTTTT AGTGTTGAAT TAACCTTAAA GTCC

>Vigan.10G004700.01
ATGATGAAGG CTGTTTTGGT GATGATTATT GTTAACCTAG CTTTGGCTTT TGTCAATATA TTTCTTAAGA AAGTGCTTAA
TGAAGGAATG GATTACTTCA CCATCTTAAC ATACCGACAA GCTATTTCAG CCATTTTCTT AGCACCTATT GCTTGCTTCT
ATGAAAGGGA AAGGAAGCTG GAGGGTCACA TAATATGTCT GCTTTTCATA AGTGCTCTTG TCGGGGTTAC CTTTACACAA
TACCTGTTTC TTATGGGACT GGAATATACA TCTGCAACTT TCTCATGTGC ATTTCTAAAT ATGGTGCCTG TATTTACCTT
TATCATGGCA CTGCCACTCG GGATAGAGAA GGTAAACATG AGAAAAGTGA GTGCTAAGGC TAAGGTTTTG GGAACTTTTG
TGTGTATTGG TGGAGCTTTG ATGTTGATCC TTTACAAAGG AATGCCCTTA ATCAAGCAAG AACAAGATCA CATTGCAGAC
AAAGGCACAA CAACAGCATC AGCTTCCAAT ATAAAGAAAT GGATAATAGG TTCACTGCTT CTGACTGCAG GATGTGGCTT
GTGGTCTTCA TGGTTTCTCA TACAAGCAAG GATTAGCAGA AAGTATCCAT GTCAATACTC TAGCACAGCC CTTTTGTCCT
TTTTTGCTGC CATTCAATCA GCAATTTTAA CTTTGCTCAT TGACAGAAGT AAGACCAAAT GGATTCTCAG AGGAAAGTTA
GAGATTCTCA CTGTTGTATA TTCTGGACTG GTTGGATCAG GGTTGTGCTA TGTGGCAATG TCATGGTGTG TGAAACAAAG
GGGTCCAGTT TTCACTTCAG CATTCACCCC TCTTCTGCAG ATGTTTGTGG CAGTGCTTGA TTTCTCTATA TTACAAGAGG
AGATTTATTT GGGAAGTGTT GCAGGATCAG TGTTGGTTAT TTCTGGCACT TATATTTTAC TTTGGGGTAA AAGTAAAGAG
GAAGAACAAA ATGCCATGAA GGATAGTCAA GAAGATGAAG AATGTATCAA CAATTTTGAG GACAATCCAA ATGTAGCCTC
TAAGCTAAGG CTTAAAGGGG AACAAGGATT ATCTGAAGTA CAAGTGAAGC AGTTGGCCAT TGAAGTAACT AGAAGCTGA

>Vigan.10G004700.01
MMKAVLVMII VNLALAFVNI FLKKVLNEGM DYFTILTYRQ AISAIFLAPI ACFYERERKL EGHIICLLFI SALVGVTFTQ
YLFLMGLEYT SATFSCAFLN MVPVFTFIMA LPLGIEKVNM RKVSAKAKVL GTFVCIGGAL MLILYKGMPL IKQEQDHIAD
KGTTTASASN IKKWIIGSLL LTAGCGLWSS WFLIQARISR KYPCQYSSTA LLSFFAAIQS AILTLLIDRS KTKWILRGKL
EILTVVYSGL VGSGLCYVAM SWCVKQRGPV FTSAFTPLLQ MFVAVLDFSI LQEEIYLGSV AGSVLVISGT YILLWGKSKE
EEQNAMKDSQ EDEECINNFE DNPNVASKLR LKGEQGLSEV QVKQLAIEVT RS*