GBrowse Details

Vigan.10G032500.01

Basic Information:
Name: Vigan.10G032500.01
Multiple alignment
Variant Information
Position: Chr10:3151795..3155807 (- strand)
Length: 4013
Functional Information:
Description: Similar to Uncharacterized protein. [I1KKL5, Glycine max]
GO: Biological Process: cellular metabolic process (GO:0044237)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: coenzyme binding (GO:0050662)
InterPro: NAD-dependent epimerase/dehydratase (IPR001509)
NAD(P)-binding domain (IPR016040)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:23.87,13.19,10.71,10.82,5.96,5.93,1.43,10.11
Arabidopsis thaliana homolog: AT1G68540.1
Automatic updates:
Name: NM_001255209 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like (LOC100808002), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:3151795..3151896 (- strand)
Length: 102
Type: three_prime_UTR
Position: Chr10:3151897..3152038 (- strand)
Length: 142
Type: CDS
Position: Chr10:3152853..3153042 (- strand)
Length: 190
Type: CDS
Position: Chr10:3154402..3154564 (- strand)
Length: 163
Type: CDS
Position: Chr10:3154648..3154833 (- strand)
Length: 186
Type: CDS
Position: Chr10:3155085..3155257 (- strand)
Length: 173
Type: CDS
Position: Chr10:3155489..3155594 (- strand)
Length: 106
Type: CDS
Position: Chr10:3155595..3155807 (- strand)
Length: 213
Type: five_prime_UTR


>Vigan.10G032500.01
ACCAAACAGA GGAGAATGCA TTTCACATGA CTATCCTGTT TCTACCAAGA ATGGGACACA CATCTCACGT GCCTCTCTTG
TGTTATCGAT TTTTGAGTTT TGTCTATTCT TTCGTAGTGA GTGGCGAGAG GTAAATAAGA GTCCTTTCCT TTATTAGACC
AATATACAAA GTGAGACTTT GAAACGAAGA ACCTGAAGAT AAAGTAGTTA GAAATGCCCG AGTTTTGCGT GACAGGAGGT
ACTGGCTTCA TCGCATCGCA CTTAATCAAG ACCTTATTAG AAAAGGGTCA TACGGTGACG ACCACCGTGA GAAACCCAGA
GGATGAGGAG AAGGTTGGTT TTCTGAGCGA ACTCAGTGGA GCGAAAGAAA GACTGAAGAT TTTGAAAGCA GATCTCTTAG
TAGAAAGAAG CTTTGAGAAG GCAGTGACAG GAGTTGATGG TGTCTTTCAT ACGGCTTCAC CTGTGCTTGT TCCATTCGAC
GAAAACGTTC AGAAGAATTT GATTGATCCA TGCGTAAAAG GAACTTTGAA CGTGCTTAAC TCCTGCTTAA AGGCAAATGT
GAAACGTTTT GTGCTCACTT CTTCTTGCTC TTCCATAAGA TACCGTGATG ATGTGCAACA ACTCTGTCCT CTTAATGAAT
CTCATTGGAC AGACCTTGAG TACTGCAAAC GCTACAACTT ATGGTATGCA TATGCAAAGA CGGTGGCAGA AAGAGAGGTT
TGGAGAATAG CAAAAGAAAA TGAAATTGAT GTAGTTGTGG TTAACCCATC TTTCGTTGTT GGTCCACTCC TTGCACCACA
ACCAACAAGT ACACTCCTCT TGATACTTGC CATTGTCAAA GGCATGAAAG GGGAATATCC TAATACAACA GTGGGGTTTG
TCCACATAAA TGATGTTGTA GCTGCTCACT TGTTGGCTAT GGAAGATACC AATGCATCTG GAAGGCTTAT TTGTTCAAGC
ACAGTAGCTC ATTGGTCACA AATCATTCAA ATGCTTCGTT CCAAATATCC CTCCTACCCA TTTGAAAACA AGTGCAGCAG
CCAGCAGGGA GATGATAACC CACACAGCAT GGACACCACC AAAATTACTC AGTTGGGGTT TCCTCCATTC ATAACCCTAG
ATAGGATGTT TGATGATTGC ATTACAAGTT TTCAAGACAA GGGTTTTCTG TGACATGTGA CAGTTGTTAT GCTTCATGTT
TCGTGTAGTG TAACCGGAAA CAAAATAAAG AAATATGAAC AAATAAAATA GTTTATATAT TATCTATTAT TTCGC

>Vigan.10G032500.01
ATGCCCGAGT TTTGCGTGAC AGGAGGTACT GGCTTCATCG CATCGCACTT AATCAAGACC TTATTAGAAA AGGGTCATAC
GGTGACGACC ACCGTGAGAA ACCCAGAGGA TGAGGAGAAG GTTGGTTTTC TGAGCGAACT CAGTGGAGCG AAAGAAAGAC
TGAAGATTTT GAAAGCAGAT CTCTTAGTAG AAAGAAGCTT TGAGAAGGCA GTGACAGGAG TTGATGGTGT CTTTCATACG
GCTTCACCTG TGCTTGTTCC ATTCGACGAA AACGTTCAGA AGAATTTGAT TGATCCATGC GTAAAAGGAA CTTTGAACGT
GCTTAACTCC TGCTTAAAGG CAAATGTGAA ACGTTTTGTG CTCACTTCTT CTTGCTCTTC CATAAGATAC CGTGATGATG
TGCAACAACT CTGTCCTCTT AATGAATCTC ATTGGACAGA CCTTGAGTAC TGCAAACGCT ACAACTTATG GTATGCATAT
GCAAAGACGG TGGCAGAAAG AGAGGTTTGG AGAATAGCAA AAGAAAATGA AATTGATGTA GTTGTGGTTA ACCCATCTTT
CGTTGTTGGT CCACTCCTTG CACCACAACC AACAAGTACA CTCCTCTTGA TACTTGCCAT TGTCAAAGGC ATGAAAGGGG
AATATCCTAA TACAACAGTG GGGTTTGTCC ACATAAATGA TGTTGTAGCT GCTCACTTGT TGGCTATGGA AGATACCAAT
GCATCTGGAA GGCTTATTTG TTCAAGCACA GTAGCTCATT GGTCACAAAT CATTCAAATG CTTCGTTCCA AATATCCCTC
CTACCCATTT GAAAACAAGT GCAGCAGCCA GCAGGGAGAT GATAACCCAC ACAGCATGGA CACCACCAAA ATTACTCAGT
TGGGGTTTCC TCCATTCATA ACCCTAGATA GGATGTTTGA TGATTGCATT ACAAGTTTTC AAGACAAGGG TTTTCTGTGA


>Vigan.10G032500.01
MPEFCVTGGT GFIASHLIKT LLEKGHTVTT TVRNPEDEEK VGFLSELSGA KERLKILKAD LLVERSFEKA VTGVDGVFHT
ASPVLVPFDE NVQKNLIDPC VKGTLNVLNS CLKANVKRFV LTSSCSSIRY RDDVQQLCPL NESHWTDLEY CKRYNLWYAY
AKTVAEREVW RIAKENEIDV VVVNPSFVVG PLLAPQPTST LLLILAIVKG MKGEYPNTTV GFVHINDVVA AHLLAMEDTN
ASGRLICSST VAHWSQIIQM LRSKYPSYPF ENKCSSQQGD DNPHSMDTTK ITQLGFPPFI TLDRMFDDCI TSFQDKGFL*