GBrowse Details

Vigan.10G066700.01

Basic Information:
Name: Vigan.10G066700.01
Multiple alignment
Variant Information
Position: Chr10:7201016..7204311 (+ strand)
Length: 3296
Functional Information:
Description: Similar to Uncharacterized protein. [I1JE29, Glycine max]
InterPro: TB2/DP1/HVA22-related protein (IPR004345)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.03,10.96,4.65,17.93,27.51,13.74,16.17
Arabidopsis thaliana homolog: AT1G69700.1
Automatic updates:
Name: NM_001248505 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306464 (LOC100306464), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:7201016..7201147 (+ strand)
Length: 132
Type: five_prime_UTR
Position: Chr10:7201148..7201209 (+ strand)
Length: 62
Type: CDS
Position: Chr10:7201344..7201370 (+ strand)
Length: 27
Type: CDS
Position: Chr10:7201462..7201584 (+ strand)
Length: 123
Type: CDS
Position: Chr10:7203433..7203700 (+ strand)
Length: 268
Type: CDS
Position: Chr10:7203921..7203989 (+ strand)
Length: 69
Type: CDS
Position: Chr10:7203990..7204311 (+ strand)
Length: 322
Type: three_prime_UTR


>Vigan.10G066700.01
TTTCAATTTT ACTTTCTTGT TTGGAGTGTC CCACTTTTGA AGCCTCTCTG TTTTCCTTTG TCTCGCTTTA CAAACCCTCA
TCTGTGTTCC AATCAAAAGG ATCCACAAAG AAAAATAGCA ACATTGCATC AAATGGGTAC TTCTGGCGAC AGTTTTCTCC
AAGTTCTCTT CAAGAACTTC GATGTTCTTG CTCTACCCTT GGTCACCCTG GTTTACCCTT TATATGCTTC GATAAAGGCC
ATAGAGAGTA GGTCTAGTAT TGATGATCAG CAATGGCTCA CTTATTGGGT TCTCTATTCT TTGATCACTC TGTTTGAGCT
CACATTTTCC AAAGTTCTTG AAGTGCTTGC CATTTGGCCT TATGCCAAGT TGATACTTAG TTGCTGGCTA GTTCTTCCGC
AGTTCAGTGG GGCAGCACAT GTTTATAGGC ACTATGTTAG ACCATTCTAT ATGAATCCAC AAATGCCACA AATGCCAAAG
TTTCCAGGAG CCTCTCAAAT GTGGTATGTT CCTCGAAAGA ACATATTTAG TAAGCAGGAT GATGTCCTTT CTGCTGCTGA
GAGGTACATG GAAGAGCATG GAACTGAAGC ATTTGAAAGA CTCATAACCA AGGCTGACAG AGAAGCTAGA GGACGGAGGA
ACGGAAGTTA TATGATCTTT GATGATGATT ATATATATTA ATTAACTGTG TTAACCCTTA AACTCATCTG TAGTATCACC
GTGGCGATAC TTTAATAGTG ATTTAAGTGT AAGACTTATG AACTTAGTTA ATCTAGATAT AAGTCTAGTT CAGGTTGAGA
TATTTCATCT AGTTAATTCA ACTATAAAGG CAAAAGGAGG AAAGATAAAA AAAATGGAGA AAGTGATGGA GAATCATTGC
CGTGATCAGA GTCAGGAGTA ATCACTACCT TCTTTTCCAA AGTTTTTTTC GACTTCAACT ATGTGGATAT GAACACACTG
ACTTTACTTT TCGCTGAACT AAATTTGATA AGAAAAATGT GCA

>Vigan.10G066700.01
ATGGGTACTT CTGGCGACAG TTTTCTCCAA GTTCTCTTCA AGAACTTCGA TGTTCTTGCT CTACCCTTGG TCACCCTGGT
TTACCCTTTA TATGCTTCGA TAAAGGCCAT AGAGAGTAGG TCTAGTATTG ATGATCAGCA ATGGCTCACT TATTGGGTTC
TCTATTCTTT GATCACTCTG TTTGAGCTCA CATTTTCCAA AGTTCTTGAA GTGCTTGCCA TTTGGCCTTA TGCCAAGTTG
ATACTTAGTT GCTGGCTAGT TCTTCCGCAG TTCAGTGGGG CAGCACATGT TTATAGGCAC TATGTTAGAC CATTCTATAT
GAATCCACAA ATGCCACAAA TGCCAAAGTT TCCAGGAGCC TCTCAAATGT GGTATGTTCC TCGAAAGAAC ATATTTAGTA
AGCAGGATGA TGTCCTTTCT GCTGCTGAGA GGTACATGGA AGAGCATGGA ACTGAAGCAT TTGAAAGACT CATAACCAAG
GCTGACAGAG AAGCTAGAGG ACGGAGGAAC GGAAGTTATA TGATCTTTGA TGATGATTAT ATATATTAA

>Vigan.10G066700.01
MGTSGDSFLQ VLFKNFDVLA LPLVTLVYPL YASIKAIESR SSIDDQQWLT YWVLYSLITL FELTFSKVLE VLAIWPYAKL
ILSCWLVLPQ FSGAAHVYRH YVRPFYMNPQ MPQMPKFPGA SQMWYVPRKN IFSKQDDVLS AAERYMEEHG TEAFERLITK
ADREARGRRN GSYMIFDDDY IY*