GBrowse Details

Vigan.10G068400.01

Basic Information:
Name: Vigan.10G068400.01
Multiple alignment
Variant Information
Position: Chr10:7610561..7614452 (- strand)
Length: 3892
Functional Information:
Description: Similar to Uncharacterized protein. [I1JBN2, Glycine max]
GO: Biological Process: transmembrane transport (GO:0055085)
InterPro: UAA transporter (IPR013657)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:6.70,21.79,26.35,15.57,64.94,35.19,26.31,21.55
Arabidopsis thaliana homolog: AT1G14360.1, AT2G02810.1
Automatic updates:
Name: NM_001255506 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max UDP-galactose/UDP-glucose transporter (LOC100811913), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:7610561..7610931 (- strand)
Length: 371
Type: three_prime_UTR
Position: Chr10:7610932..7611340 (- strand)
Length: 409
Type: CDS
Position: Chr10:7612228..7612349 (- strand)
Length: 122
Type: CDS
Position: Chr10:7612450..7612553 (- strand)
Length: 104
Type: CDS
Position: Chr10:7613127..7613157 (- strand)
Length: 31
Type: CDS
Position: Chr10:7613467..7613597 (- strand)
Length: 131
Type: CDS
Position: Chr10:7613831..7613928 (- strand)
Length: 98
Type: CDS
Position: Chr10:7614030..7614133 (- strand)
Length: 104
Type: CDS
Position: Chr10:7614134..7614452 (- strand)
Length: 319
Type: five_prime_UTR


>Vigan.10G068400.01
CAAGAAACTG ACGAAAAGAC CAAATAGGGT GGACCGACAT TAGGAGGAGT CTACCGCTAA AAAGTGAAAA CGCGGCACGC
GTTGGCGCGT CCAATGGGAG CGTAATGACA TGGCATCATC CAATAATACT CAGCCACGTG GCGAATCCAC GTAGCATAGC
TTGGCGCACA CTTCACACTT CTAAGCTCCT TCTTTCACTG TCCCCATTTC TATTATTATT TCATTATTTG ATCCATTCTT
CACCGCGGTT GCTTCTCTCA ACGGCGTTTC CTTCATTCAA TACTCTATAA TAGTAAAAGA ACCGAATCGT GCGGATCTCA
TGGAGGCCCA CGGCGGAGGG CTCCGCCGCA TCCTGCTCCT CGCCTTCTGC GTCGCCGGAA TCTGGTCGGC CTACATCTAC
CAAGGCGTTC TGCAGGAAAA CGTGTCGACC AAGCGATTCG GTCCGAACGG TGAAAGGTTC GAGCACCTTG CGTTTCTGAA
CTTGGCGCAG AGTGTGGTGT GTTTAATCTG GTCGTTTATA ATGATAAAGA TATGGTCCAG TGGAAATTCT GGTGGTGCTC
CTTGGTGGAG TTATTGGAGC GCTGGAATTA CCAACACCAT TGGTCCCGCT ATGGGAATTG AAGCTTTGAA GTATATTAGT
TACCCTGCTC AGGTGCTGGC GAAGTCTTCC AAAATGATTC CAGTTATGTT GATGGGTACT CTAGTATATG GGATAAGATA
CTCTCTTCCA GAATACATTT GTACATTCCT TGTTGCTGGA GGGGTATCAA CATTTGCTCT TCTAAAGACG AGCTCAAAGA
CAATCAGCAA GCTGGCACAT CCAAATGCTC CCCTTGGCTA TGGGTTATGT TTCCTGAACC TTGCTTTTGA TGGATTTACC
AATGCTACCC AGGATTCTAT AAAAGGAAGG TATCCAAAAA CAAGTGCTTG GGGTATTATG CTGGGCATGA ATTTATGGGG
AACCATATAC AATTTGATTT ACATGTTCGG ATGGCCCCAT GCCAGTGGAT TTGAGGCAGT TCGATTCTGC AAACAGTATC
CAGAGGCAGC ATGGGATATT TTTCTCTATT GTTGCTGCGG TGCTGTGGGC CAAAATTTTA TCTTCTTGAC CATAAGCCGG
TTTGGCTCTT TGGCAAACAC TACCATCACT ACCACCCGCA AATTTGTTAG CATTGTGATA TCTTCCGTAT TGAGTGGGAA
TCCCCTGTCA ACAAAGCAAT GGGGGTGTGT TTTTATGGTG TTCTCAGGAT TGTCTTATCA GATCTATCTC AAGTGGGAGA
AGTTGCAGAG ATTGCAGAAG AAAAGAAAAG CCATGTGAAG CCTTCAGCAA TTTTGAAGTC AACGTTAATA CTATCCTAGT
TAATTTGCCC CCTTACTAAA ACCTTGAAGG TTTAATGAAC CGGATTTAGG TTTAAGCAAA AAAAAAATAT ATATATATGT
AATTTTAATT GATAGATACT TTCCGAGAAA AGTTCAAAGT TTAGTCACCA TTTTCTCATT CCTTTTGGAT ATTTTTAGTT
GCCTGCATTT TACTGAAATG CTGGATTTAG TTTGAGTATA ATACTAAGAT AAAGTTATAC TCTCTGTAAA CATGATTGTC
AGAAGATCAC ATCACCTCGT TTGTTTAGAG ATCATCACAG TATCGTATGA ACCCCAAAAT TAGCTTTGCT GGTTTATTTT
GCTTCCAGA

>Vigan.10G068400.01
ATGGAGGCCC ACGGCGGAGG GCTCCGCCGC ATCCTGCTCC TCGCCTTCTG CGTCGCCGGA ATCTGGTCGG CCTACATCTA
CCAAGGCGTT CTGCAGGAAA ACGTGTCGAC CAAGCGATTC GGTCCGAACG GTGAAAGGTT CGAGCACCTT GCGTTTCTGA
ACTTGGCGCA GAGTGTGGTG TGTTTAATCT GGTCGTTTAT AATGATAAAG ATATGGTCCA GTGGAAATTC TGGTGGTGCT
CCTTGGTGGA GTTATTGGAG CGCTGGAATT ACCAACACCA TTGGTCCCGC TATGGGAATT GAAGCTTTGA AGTATATTAG
TTACCCTGCT CAGGTGCTGG CGAAGTCTTC CAAAATGATT CCAGTTATGT TGATGGGTAC TCTAGTATAT GGGATAAGAT
ACTCTCTTCC AGAATACATT TGTACATTCC TTGTTGCTGG AGGGGTATCA ACATTTGCTC TTCTAAAGAC GAGCTCAAAG
ACAATCAGCA AGCTGGCACA TCCAAATGCT CCCCTTGGCT ATGGGTTATG TTTCCTGAAC CTTGCTTTTG ATGGATTTAC
CAATGCTACC CAGGATTCTA TAAAAGGAAG GTATCCAAAA ACAAGTGCTT GGGGTATTAT GCTGGGCATG AATTTATGGG
GAACCATATA CAATTTGATT TACATGTTCG GATGGCCCCA TGCCAGTGGA TTTGAGGCAG TTCGATTCTG CAAACAGTAT
CCAGAGGCAG CATGGGATAT TTTTCTCTAT TGTTGCTGCG GTGCTGTGGG CCAAAATTTT ATCTTCTTGA CCATAAGCCG
GTTTGGCTCT TTGGCAAACA CTACCATCAC TACCACCCGC AAATTTGTTA GCATTGTGAT ATCTTCCGTA TTGAGTGGGA
ATCCCCTGTC AACAAAGCAA TGGGGGTGTG TTTTTATGGT GTTCTCAGGA TTGTCTTATC AGATCTATCT CAAGTGGGAG
AAGTTGCAGA GATTGCAGAA GAAAAGAAAA GCCATGTGA

>Vigan.10G068400.01
MEAHGGGLRR ILLLAFCVAG IWSAYIYQGV LQENVSTKRF GPNGERFEHL AFLNLAQSVV CLIWSFIMIK IWSSGNSGGA
PWWSYWSAGI TNTIGPAMGI EALKYISYPA QVLAKSSKMI PVMLMGTLVY GIRYSLPEYI CTFLVAGGVS TFALLKTSSK
TISKLAHPNA PLGYGLCFLN LAFDGFTNAT QDSIKGRYPK TSAWGIMLGM NLWGTIYNLI YMFGWPHASG FEAVRFCKQY
PEAAWDIFLY CCCGAVGQNF IFLTISRFGS LANTTITTTR KFVSIVISSV LSGNPLSTKQ WGCVFMVFSG LSYQIYLKWE
KLQRLQKKRK AM*