GBrowse Details

Vigan.10G085000.01

Basic Information:
Name: Vigan.10G085000.01
Multiple alignment
Variant Information
Position: Chr10:9741040..9750395 (+ strand)
Length: 9356
Functional Information:
Description: Similar to SymRK-like receptor. [E9N017, Phaseolus vulgaris]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: protein serine/threonine kinase activity (GO:0004674)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
Serine-threonine/tyrosine-protein kinase catalytic domain (IPR001245)
Serine/threonine- / dual specificity protein kinase, catalytic domain (IPR002290)
Serine/threonine-protein kinase, active site (IPR008271)
Protein kinase-like domain (IPR011009)
Concanavalin A-like lectin/glucanase, subgroup (IPR013320)
Protein kinase, ATP binding site (IPR017441)
Malectin-like carbohydrate-binding domain (IPR024788)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.54,0.36,0.25,0.30,41.94,1.00,60.31,1.48
Automatic updates:
Name: KY399791 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max SYMRKa (SYMRKa) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: KY399792 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max SYMRKb (SYMRKb) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:9741040..9741519 (+ strand)
Length: 480
Type: five_prime_UTR
Position: Chr10:9741520..9741619 (+ strand)
Length: 100
Type: CDS
Position: Chr10:9741922..9742426 (+ strand)
Length: 505
Type: CDS
Position: Chr10:9743027..9743493 (+ strand)
Length: 467
Type: CDS
Position: Chr10:9743901..9744048 (+ strand)
Length: 148
Type: CDS
Position: Chr10:9744485..9744556 (+ strand)
Length: 72
Type: CDS
Position: Chr10:9744660..9744728 (+ strand)
Length: 69
Type: CDS
Position: Chr10:9745431..9745502 (+ strand)
Length: 72
Type: CDS
Position: Chr10:9745614..9745685 (+ strand)
Length: 72
Type: CDS
Position: Chr10:9745766..9745941 (+ strand)
Length: 176
Type: CDS
Position: Chr10:9746568..9746794 (+ strand)
Length: 227
Type: CDS
Position: Chr10:9747041..9747167 (+ strand)
Length: 127
Type: CDS
Position: Chr10:9747240..9747308 (+ strand)
Length: 69
Type: CDS
Position: Chr10:9748184..9748373 (+ strand)
Length: 190
Type: CDS
Position: Chr10:9748830..9748962 (+ strand)
Length: 133
Type: CDS
Position: Chr10:9749054..9749392 (+ strand)
Length: 339
Type: CDS
Position: Chr10:9749393..9750395 (+ strand)
Length: 1003
Type: three_prime_UTR


>Vigan.10G085000.01
TATCAATATT AAATACACAT AATCAAGCAA CCACCACCAC CACTCCATGA AAAATAATGT TTAACATCAA TAACATATAA
AACTATAAAA GAAATATTTA ACAATGGATT TATACTAATT CAATCTCCTT ACTCGTCTTC CATCTCTTTC CTATCTACTA
CCTCCTGCAG TTTCCAGGCT TGAAGTCAAA CCCCTATTTC TCAAGGATAT TTGTTCTTCT AATCCTCCAA CCAATTCAGT
ACTTGTGCAA AATGGCTTCA AAATCTTTCA CAAGAGACAA GTTCTCAGAA TTATGGGATT AGGCAAGCTT TCTTTCATTT
CTCCCCTAAT CTGAGATATA GGAAAACTCA AGAGTGTTGG TGATCAAGGC AGAGAAAGAA ATGGAATTCA GAAGAAAATT
TATGGTACTA GGTGGAAGAT GAAGTGTTAG TTGGCATGAT TCAAGTTTGC AAACCAATGG GGTAACCCCT ATTCCAGATT
ATGATGGAGT TACTCGAAAT TTGGGTATTG AAACTGGTTG TGGCATGTGC TGTTTGTCTG CATATATTTA TCAGATCAGT
TTCTGGCTCT GCAACTGAAG GGTTTGAAAA CATAGCATGT TGTGCTGATT CAAATTACAC AGATCCCCAG ACCACCTTAA
ATTACACAAC AGATTACACA TGGTTCCCTA ACAGAGGAAG CTGCAGAAGA CCTAAAATTG GTTTGAATGA AAAAGTTCGA
CTGTTTTCTA TAGATGAAGG AAAGAGATGT TACAATTTAC CAACAATTAA GAATAAAGTA TATCTGATAA GGGGCACGTT
TCCATTTGAC AGTATAAATT CTTCATTTAA TGTTTCAATT GGGGTAACAC AATTAGGTGC AGTGAGACCA TCCACGCCCC
AGGACTTGGA AATTGAGATT GAGGGAGTTT TTAGGGCTAC CAAAGACTAC ATTGACTTCT GCTTAGTGAA GGGGGAGGTG
GATCCGTTCA TTTCTCAGCT GGAATTAAGG CCATTGCCAG AAGATTACCT ACTTCATGAT TTGCCTGCCA GCGTTTTAAA
ATTGATAAGC AGAAATAGTC TCTGGGACAC AAAAGATGAA ATCAGGTTCC CAGATGACCC AAGTGATAGA ATATGGAAAG
CAACTTCAAG TCCGTCATCT GCTCTCCCGT TGTCTTACAA TGATAAAAAT TTTGACCTCA AATCCAACAT GACACCACCT
CTACGAGTCC TACAGACAGC TCTTACCCAC CCTGAGAGAT TGGAGATCCA CAGCAGCCTT GACACTGAGG ATTATGAATA
TCGTATATTT CTCTACTTCC TTGAATTAAA TAGCACTGTC AAAGAAGGGA AAAGGGTGTT TGACATCTAT GTTAATAGTG
AGATTCAAAG GGAAAAGTTT GACATATTGG CGAGAGGGTC CAACTATACA TACACTGTCT TGAATGTTTC AGCAAACGGT
TTACTTAATT TAACCTTGGT CAAGGCATCT GGTGCTGAGT TTGGACCCCT TTTGAATGCT TATGAGATCT TGCAAATGCG
ACCATGGATT GAAGAGACCA ACCAAAAAGA TGTGGAAGTG ATTCAGAAGA TTAGAGAAGA ACTGTTGTTG CAAAACCAAG
ACACTAAAGT GCTAGAGAGT TGGACCGGAG ACCCTTGTAT TTTCCCCTGG CACGGAATAG AGTGTGATGG TTCAAATGGC
TCGTCTGTTA TCACCAAGCT GGATCTTTCC TCAAGTAATT TCAAAGGACC AATTCCTTCT ACTGTTACTG AGATGACCAA
CTTAAAAATA CTGAACCTGA GCCACAACAA TTTCAATGGA TATATTCCCT CGTTTCCACC GTCCTCCTTG TTGATATCAA
TAGATCTAAG CTACAATGAT CTTATGGGGT CACTTCCAGA ATCAATTGTC TCACTGCCAT ATTTGAAATC TTTGTATTAT
GCCTGCAACA AACGCATGAG TGAAGACACT CCAGCTAATT TGAATGGTTC CCTGATCAAT ACAGATTACG GAAGATGCAA
AGCAAAGGAA CCTAGATTTG GACAAGTATT TGTCATTGGT GCTATCACAT GTGGATCACT TCTGATCACA TTGGCAGTTG
GAATCATTTT TGTTTGCCGC TATAGACAAA AGTTGATTCC ATGGGAAGGA TTTGGTGGAA AGAACTACTT AATGGAAACA
AATGTAATAT TCTCTTTGCC AAGCAAAGAT GATTTCTTAA TAAAGTCTGT ATCAATTCAA ACATTCACTC TGGAAGATAT
AGAGGTTGCC ACAGAAAGGT ACAAAACTTT GATAGGAGAA GGAGGATTTG GTTCTGTTTA CAGGGGCACT CTAAATGACG
GTCAAGAAGT GGCAGTGAAA GTCCGTTCAG CAACATCAAC TCAGGGAACT CGAGAATTTG ATAATGAGTT AAACCTTCTT
TCGGCAATAC AGCATGAAAA CCTAGTGCCT CTTCTTGGTT ACTGTAATGA AAATGATCAA CAAATTCTTG TGTATCCTTT
CATGTCAAAT GGTTCTTTGC AAGACAGACT CTACGGGGAA CCCGCAAAGA GAAAAATATT AGACTGGCCA ACTAGACTCT
CTATTGCTCT TGGTGCAGCT CGAGGTTTGG CATATCTTCA CACATTTCCA GGACGTTCAG TAATACACAG GGACGTGAAA
TCAAGCAATA TACTTCTAGA TCATAGCATG TGCGCTAAGG TTGCCGATTT TGGTTTCTCA AAATATGCTC CTCAGGAAGG
AGACAGTAAC GTTTCTCTTG AAGTCAGAGG AACTGCAGGG TACCTGGATC CTGAATATTA CAAAACTCAA CAATTATCTG
AGAAGAGTGA TGTCTTCAGC TATGGTGTGG TTTTACTTGA AATTCTGACT GGGAGGGAAC CTCTTGACAT AAAGAGACCA
CGGAATGAGT GGAGCTTGGT TGAATGGGCT AAGCCATATA TACGAGCATC AAAGATGGAA GAAATTATGG ACCCTGGCAT
CAAGGGGGGA TACCATGCAG AGGCAATGTG GAGAGTGGTG GAAGTAGCAC TGCAATGTCT TGAACCCTTC TCAGAATATA
GACCAAGCAT GGTGGACATT GTTCGTGAGT TAGAGGATGC GCTCATCATA GAAAATAATG CATCAGAATA CATGAAGTCC
ATTGACAGCC TTGGAGGATC CAACCGCTAC TCTATTGTCA TAGAGAAAAG GGTGCTGCCC TCAACTTCAT CAACAGCAGA
ATCAACCATC ACAACCCAAG CCTTGTCCCA TCCTCAGCCG AGATAGTATA TGGTTGAAAA TGGAATTCTT TTGATTTGTT
TTTCATAACT GCTTTAGTAA TTATACATTT CATATGGTAA AAAGGAGAAA ATGCTAGTTT TTGTGATGGT ACTTTCATCC
ACTCTATGCA CCTTCAGACT AATCTCTTGC TCGGCCTCAT TTTTATGAGT GAAAAGAATA AAGTGGGAGT CATGCAAAAG
GCCATATCAT TTGTCAAGTC CAAACTTGAC TGATAAAAAA TTGCGTAAAC TAAATTGATT GTGATTTAAT CTTAAAACAG
TAGAACTGTG CATTGAACAA AGCTAAATCT TTTATTGATG GACTTGGACT GGTTGCATAA AGCAGGAGGA ACACCTAAAT
CTGTAAGGAA TATACTAAGT CCAGCCAAGC AATTATTAAG GGGTCCTTTT ATCTCTTTTT CTCAGGGTAC AAATACGTCA
ACAACATAAA TGTTGGCAAC TTGTATGTTC TTATTATTGT GGAATCACGA TTGAAGTACT ACTGATAAAC AATCATCGCG
TCAATGTCTT CCTAGAACAA TGGTTTATGG ACGAGGAATG AGTTGACCAT AAAGACAAGT CACGTGTTGT TTCTTAGGAA
GCATTCATAA AACTCAAACC TTAATGAATA TTTCAAGTTT TGGACTGTCC AAACTCTCAA ATGAAACGGA GGGAGAGGAA
AGGTTTTATT GTATTTTGCG AAGCAACTTT ATTACAAGAA AACAATTTCC TCGGAAACCA ACAATCCTCA TTCTGAGTTT
ATAGCGTCCC TCTGAAACAT CTATTCTTTG ATGGGTATTA TTGAACAAAT GATTGACTGT GACAAAGCAT AGTTTTTAAC
GAGTTATTGC ATCCTTACAA TATATTCTAT TAACATTTTT CCACAACTTA ATTTTTTTCT CTACATTAAT GTCTTTATCT
TACCCTATCT CCTTATCTTT TTCCCAATCG TAAAAAAAGT CATAGAAAAC GATTGCAGGA ACAAATTTTT CATTTATGAT
AGGCTTGAG

>Vigan.10G085000.01
ATGATGGAGT TACTCGAAAT TTGGGTATTG AAACTGGTTG TGGCATGTGC TGTTTGTCTG CATATATTTA TCAGATCAGT
TTCTGGCTCT GCAACTGAAG GGTTTGAAAA CATAGCATGT TGTGCTGATT CAAATTACAC AGATCCCCAG ACCACCTTAA
ATTACACAAC AGATTACACA TGGTTCCCTA ACAGAGGAAG CTGCAGAAGA CCTAAAATTG GTTTGAATGA AAAAGTTCGA
CTGTTTTCTA TAGATGAAGG AAAGAGATGT TACAATTTAC CAACAATTAA GAATAAAGTA TATCTGATAA GGGGCACGTT
TCCATTTGAC AGTATAAATT CTTCATTTAA TGTTTCAATT GGGGTAACAC AATTAGGTGC AGTGAGACCA TCCACGCCCC
AGGACTTGGA AATTGAGATT GAGGGAGTTT TTAGGGCTAC CAAAGACTAC ATTGACTTCT GCTTAGTGAA GGGGGAGGTG
GATCCGTTCA TTTCTCAGCT GGAATTAAGG CCATTGCCAG AAGATTACCT ACTTCATGAT TTGCCTGCCA GCGTTTTAAA
ATTGATAAGC AGAAATAGTC TCTGGGACAC AAAAGATGAA ATCAGGTTCC CAGATGACCC AAGTGATAGA ATATGGAAAG
CAACTTCAAG TCCGTCATCT GCTCTCCCGT TGTCTTACAA TGATAAAAAT TTTGACCTCA AATCCAACAT GACACCACCT
CTACGAGTCC TACAGACAGC TCTTACCCAC CCTGAGAGAT TGGAGATCCA CAGCAGCCTT GACACTGAGG ATTATGAATA
TCGTATATTT CTCTACTTCC TTGAATTAAA TAGCACTGTC AAAGAAGGGA AAAGGGTGTT TGACATCTAT GTTAATAGTG
AGATTCAAAG GGAAAAGTTT GACATATTGG CGAGAGGGTC CAACTATACA TACACTGTCT TGAATGTTTC AGCAAACGGT
TTACTTAATT TAACCTTGGT CAAGGCATCT GGTGCTGAGT TTGGACCCCT TTTGAATGCT TATGAGATCT TGCAAATGCG
ACCATGGATT GAAGAGACCA ACCAAAAAGA TGTGGAAGTG ATTCAGAAGA TTAGAGAAGA ACTGTTGTTG CAAAACCAAG
ACACTAAAGT GCTAGAGAGT TGGACCGGAG ACCCTTGTAT TTTCCCCTGG CACGGAATAG AGTGTGATGG TTCAAATGGC
TCGTCTGTTA TCACCAAGCT GGATCTTTCC TCAAGTAATT TCAAAGGACC AATTCCTTCT ACTGTTACTG AGATGACCAA
CTTAAAAATA CTGAACCTGA GCCACAACAA TTTCAATGGA TATATTCCCT CGTTTCCACC GTCCTCCTTG TTGATATCAA
TAGATCTAAG CTACAATGAT CTTATGGGGT CACTTCCAGA ATCAATTGTC TCACTGCCAT ATTTGAAATC TTTGTATTAT
GCCTGCAACA AACGCATGAG TGAAGACACT CCAGCTAATT TGAATGGTTC CCTGATCAAT ACAGATTACG GAAGATGCAA
AGCAAAGGAA CCTAGATTTG GACAAGTATT TGTCATTGGT GCTATCACAT GTGGATCACT TCTGATCACA TTGGCAGTTG
GAATCATTTT TGTTTGCCGC TATAGACAAA AGTTGATTCC ATGGGAAGGA TTTGGTGGAA AGAACTACTT AATGGAAACA
AATGTAATAT TCTCTTTGCC AAGCAAAGAT GATTTCTTAA TAAAGTCTGT ATCAATTCAA ACATTCACTC TGGAAGATAT
AGAGGTTGCC ACAGAAAGGT ACAAAACTTT GATAGGAGAA GGAGGATTTG GTTCTGTTTA CAGGGGCACT CTAAATGACG
GTCAAGAAGT GGCAGTGAAA GTCCGTTCAG CAACATCAAC TCAGGGAACT CGAGAATTTG ATAATGAGTT AAACCTTCTT
TCGGCAATAC AGCATGAAAA CCTAGTGCCT CTTCTTGGTT ACTGTAATGA AAATGATCAA CAAATTCTTG TGTATCCTTT
CATGTCAAAT GGTTCTTTGC AAGACAGACT CTACGGGGAA CCCGCAAAGA GAAAAATATT AGACTGGCCA ACTAGACTCT
CTATTGCTCT TGGTGCAGCT CGAGGTTTGG CATATCTTCA CACATTTCCA GGACGTTCAG TAATACACAG GGACGTGAAA
TCAAGCAATA TACTTCTAGA TCATAGCATG TGCGCTAAGG TTGCCGATTT TGGTTTCTCA AAATATGCTC CTCAGGAAGG
AGACAGTAAC GTTTCTCTTG AAGTCAGAGG AACTGCAGGG TACCTGGATC CTGAATATTA CAAAACTCAA CAATTATCTG
AGAAGAGTGA TGTCTTCAGC TATGGTGTGG TTTTACTTGA AATTCTGACT GGGAGGGAAC CTCTTGACAT AAAGAGACCA
CGGAATGAGT GGAGCTTGGT TGAATGGGCT AAGCCATATA TACGAGCATC AAAGATGGAA GAAATTATGG ACCCTGGCAT
CAAGGGGGGA TACCATGCAG AGGCAATGTG GAGAGTGGTG GAAGTAGCAC TGCAATGTCT TGAACCCTTC TCAGAATATA
GACCAAGCAT GGTGGACATT GTTCGTGAGT TAGAGGATGC GCTCATCATA GAAAATAATG CATCAGAATA CATGAAGTCC
ATTGACAGCC TTGGAGGATC CAACCGCTAC TCTATTGTCA TAGAGAAAAG GGTGCTGCCC TCAACTTCAT CAACAGCAGA
ATCAACCATC ACAACCCAAG CCTTGTCCCA TCCTCAGCCG AGATAG

>Vigan.10G085000.01
MMELLEIWVL KLVVACAVCL HIFIRSVSGS ATEGFENIAC CADSNYTDPQ TTLNYTTDYT WFPNRGSCRR PKIGLNEKVR
LFSIDEGKRC YNLPTIKNKV YLIRGTFPFD SINSSFNVSI GVTQLGAVRP STPQDLEIEI EGVFRATKDY IDFCLVKGEV
DPFISQLELR PLPEDYLLHD LPASVLKLIS RNSLWDTKDE IRFPDDPSDR IWKATSSPSS ALPLSYNDKN FDLKSNMTPP
LRVLQTALTH PERLEIHSSL DTEDYEYRIF LYFLELNSTV KEGKRVFDIY VNSEIQREKF DILARGSNYT YTVLNVSANG
LLNLTLVKAS GAEFGPLLNA YEILQMRPWI EETNQKDVEV IQKIREELLL QNQDTKVLES WTGDPCIFPW HGIECDGSNG
SSVITKLDLS SSNFKGPIPS TVTEMTNLKI LNLSHNNFNG YIPSFPPSSL LISIDLSYND LMGSLPESIV SLPYLKSLYY
ACNKRMSEDT PANLNGSLIN TDYGRCKAKE PRFGQVFVIG AITCGSLLIT LAVGIIFVCR YRQKLIPWEG FGGKNYLMET
NVIFSLPSKD DFLIKSVSIQ TFTLEDIEVA TERYKTLIGE GGFGSVYRGT LNDGQEVAVK VRSATSTQGT REFDNELNLL
SAIQHENLVP LLGYCNENDQ QILVYPFMSN GSLQDRLYGE PAKRKILDWP TRLSIALGAA RGLAYLHTFP GRSVIHRDVK
SSNILLDHSM CAKVADFGFS KYAPQEGDSN VSLEVRGTAG YLDPEYYKTQ QLSEKSDVFS YGVVLLEILT GREPLDIKRP
RNEWSLVEWA KPYIRASKME EIMDPGIKGG YHAEAMWRVV EVALQCLEPF SEYRPSMVDI VRELEDALII ENNASEYMKS
IDSLGGSNRY SIVIEKRVLP STSSTAESTI TTQALSHPQP R*