GBrowse Details

Vigan.10G087400.01

Basic Information:
Name: Vigan.10G087400.01
Multiple alignment
Variant Information
Position: Chr10:10034706..10038655 (+ strand)
Length: 3950
Functional Information:
Description: Similar to Uncharacterized protein. [I1J4Z0, Glycine max]
InterPro: Exostosin-like (IPR004263)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:4.46,4.13,9.81,7.61,13.25,19.43,9.90,10.23
Arabidopsis thaliana homolog: AT4G38040.1
Automatic updates:
Name: NM_001255565 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max exostosin family protein (LOC100777368), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:10034706..10034923 (+ strand)
Length: 218
Type: five_prime_UTR
Position: Chr10:10034924..10035043 (+ strand)
Length: 120
Type: CDS
Position: Chr10:10035125..10035478 (+ strand)
Length: 354
Type: CDS
Position: Chr10:10036026..10036312 (+ strand)
Length: 287
Type: CDS
Position: Chr10:10036860..10037092 (+ strand)
Length: 233
Type: CDS
Position: Chr10:10037830..10037987 (+ strand)
Length: 158
Type: CDS
Position: Chr10:10038162..10038263 (+ strand)
Length: 102
Type: CDS
Position: Chr10:10038264..10038655 (+ strand)
Length: 392
Type: three_prime_UTR


>Vigan.10G087400.01
AGAAAATTAG ATTAGCGAGA GCCAGCGAAG CATTTGCATA GGAAAATGGT AGGAGTGAGA AAGGAAGGTT CCAAGCCTCA
AATCGCAGAT TTCATCTCCT TCTGCTTCAT CTCTTACTCT CATCACATCA CTCGAATCTA ACCGCACAGA CTGATACATT
CATAGATCAA AATCAAAGGT AAGAAAACTT CGCAGCAGGG TTGAATCCAA TACTGATTAT GACGGGGAAG CAACAATCCT
CGTTCTTCTC TCTGCGAGGT TCTCTCCTGT TCCTCGCAAT CCTCACCCTT CTCTCCTTCA CCTACCTCGC TCTCAGATAC
TCCACCCCGC CACCCCAGGT TTCCAAGTTC TCCGTCACGA AGCTCAACGA CGCGCGGGGA ACCGGGAAAG AAGAGGAGTG
TGGAGGAGGA GGAGGAGGAG GAGAAGAAGA AGAAGAACTG TATTCGGACA CGTTTCACTC TCCGCGTGTG TTCAAGCTGA
ACTACGAGGA GATGGAGAAG AAGTTCAAGG TGTATATATA CCCTGATGGG GATCCCAACA CGTTCTACCA GACGCCGAGG
AAGCTCACTG GGAAGTACGC CAGCGAGGGC TATTTCTTCC AGAACATCAG AGAGAGTCAC TTCCGCACCG AAAACCCCGA
TGAGGCGCAC CTCTTCTTCA TCCCCATCTC GTGTCACAAG ATGCGCGGCA AGGGCACGTC TTATGAGAAC ATGACGATCA
TAGTACAAAA TTATGTGGAG GGCTTGATAT CCAAATATCC TTATTGGAAC AGAACCTTGG GTGCTGATCA CTTCTTTGTC
ACTTGTCATG ATGTTGGTGT GAGGGCAACG GAAGGTCTTG AGTTGCTTGT GAAAAATTCC ATTCGAGCAG TCTGTTCCCC
CAGCTATGAT GTTGGATTTA TTCCTCACAA AGATGTTGCT CTGCCTCAAG TGCTACAGCC TTTTGCTCTT CCTTCTGGGG
GGAATGATGT AGAAAACAGG ACTCAACTTG GATTTTGGGC TGGTCATCGT AACTCTAAAA TTAGAGTTAT TCTTGCACGT
GTGTGGGAAA ATGACACAGA ACTTGATATT TCAAACAACA GAATTAGTAG GGCTACTGGG CATCTAGTGT ACCAGAAGAG
ATTTTACAGG AGTAAATTTT GTATATGTCC TGGTGGATCC CAGGTCAATA GTGCTCGAAT AGCAGACTCT ATCCATTATG
GGTGCATCCC TGTGATATTG TCAAATTACT ATGACCTTCC TTTTAATGAT ATTCTTGACT GGAATAAATT TGCTGTGGTA
CTCAAAGAGA AAGATGTATA CCAGCTTAAA CAAATCCTCA AAAATATATC AGATGCCGAG TTTGTTACAC TTCATTATAA
TTTGGTAAAG GTTCAGAAAC ATTTCCAATG GAATTCACCC CCAATCACAT TTGATGCTTT CCATATGGTT ATGTATGACC
TCTGGTTACG CCATCACACG ATCAAATACT GATATTTAGA CTCACTCTAA AACACTCTTG TTTTGTATAC AACTTACAGT
TTTAGCAACC GAGAGAGCAC TGTAAATAGC CAATTACAGT TTTGTATACA GCAGCTGGCT TATTCTATAT TCTTGCACCC
ACAACATTTC GGTTAATTTG TTATTTGTTT GCGGTAAGGC TTTGTTGGGT TGAAACTAAT ACATAGCCAA GCCACTAAGG
CTGGTGCAAT TGTTCAAGTT GTTCAAAATC CTAACTAGAA CATGGGTCGG CTTGGCTTTC AATTGTAACA CCTGACTGAC
TCGTGGTAGT TATTTAACTG TATGCTTACA TATGTTTGGA TAATATTACC CTGGAATAAA GGCCATCAGG TATTAGTAGT
CATGCACTAT CATTTTGGTC ATCT

>Vigan.10G087400.01
ATGACGGGGA AGCAACAATC CTCGTTCTTC TCTCTGCGAG GTTCTCTCCT GTTCCTCGCA ATCCTCACCC TTCTCTCCTT
CACCTACCTC GCTCTCAGAT ACTCCACCCC GCCACCCCAG GTTTCCAAGT TCTCCGTCAC GAAGCTCAAC GACGCGCGGG
GAACCGGGAA AGAAGAGGAG TGTGGAGGAG GAGGAGGAGG AGGAGAAGAA GAAGAAGAAC TGTATTCGGA CACGTTTCAC
TCTCCGCGTG TGTTCAAGCT GAACTACGAG GAGATGGAGA AGAAGTTCAA GGTGTATATA TACCCTGATG GGGATCCCAA
CACGTTCTAC CAGACGCCGA GGAAGCTCAC TGGGAAGTAC GCCAGCGAGG GCTATTTCTT CCAGAACATC AGAGAGAGTC
ACTTCCGCAC CGAAAACCCC GATGAGGCGC ACCTCTTCTT CATCCCCATC TCGTGTCACA AGATGCGCGG CAAGGGCACG
TCTTATGAGA ACATGACGAT CATAGTACAA AATTATGTGG AGGGCTTGAT ATCCAAATAT CCTTATTGGA ACAGAACCTT
GGGTGCTGAT CACTTCTTTG TCACTTGTCA TGATGTTGGT GTGAGGGCAA CGGAAGGTCT TGAGTTGCTT GTGAAAAATT
CCATTCGAGC AGTCTGTTCC CCCAGCTATG ATGTTGGATT TATTCCTCAC AAAGATGTTG CTCTGCCTCA AGTGCTACAG
CCTTTTGCTC TTCCTTCTGG GGGGAATGAT GTAGAAAACA GGACTCAACT TGGATTTTGG GCTGGTCATC GTAACTCTAA
AATTAGAGTT ATTCTTGCAC GTGTGTGGGA AAATGACACA GAACTTGATA TTTCAAACAA CAGAATTAGT AGGGCTACTG
GGCATCTAGT GTACCAGAAG AGATTTTACA GGAGTAAATT TTGTATATGT CCTGGTGGAT CCCAGGTCAA TAGTGCTCGA
ATAGCAGACT CTATCCATTA TGGGTGCATC CCTGTGATAT TGTCAAATTA CTATGACCTT CCTTTTAATG ATATTCTTGA
CTGGAATAAA TTTGCTGTGG TACTCAAAGA GAAAGATGTA TACCAGCTTA AACAAATCCT CAAAAATATA TCAGATGCCG
AGTTTGTTAC ACTTCATTAT AATTTGGTAA AGGTTCAGAA ACATTTCCAA TGGAATTCAC CCCCAATCAC ATTTGATGCT
TTCCATATGG TTATGTATGA CCTCTGGTTA CGCCATCACA CGATCAAATA CTGA

>Vigan.10G087400.01
MTGKQQSSFF SLRGSLLFLA ILTLLSFTYL ALRYSTPPPQ VSKFSVTKLN DARGTGKEEE CGGGGGGGEE EEELYSDTFH
SPRVFKLNYE EMEKKFKVYI YPDGDPNTFY QTPRKLTGKY ASEGYFFQNI RESHFRTENP DEAHLFFIPI SCHKMRGKGT
SYENMTIIVQ NYVEGLISKY PYWNRTLGAD HFFVTCHDVG VRATEGLELL VKNSIRAVCS PSYDVGFIPH KDVALPQVLQ
PFALPSGGND VENRTQLGFW AGHRNSKIRV ILARVWENDT ELDISNNRIS RATGHLVYQK RFYRSKFCIC PGGSQVNSAR
IADSIHYGCI PVILSNYYDL PFNDILDWNK FAVVLKEKDV YQLKQILKNI SDAEFVTLHY NLVKVQKHFQ WNSPPITFDA
FHMVMYDLWL RHHTIKY*