GBrowse Details

Vigan.10G119600.01

Basic Information:
Name: Vigan.10G119600.01
Multiple alignment
Variant Information
Position: Chr10:17398668..17401283 (- strand)
Length: 2616
Functional Information:
Description: Similar to Zinc finger and BTB domain-containing protein 11 isoform 1. [XP_007019800.1, Theobroma cacao]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:43.30,21.46,40.22,65.09,29.38,74.80,27.34,25.32
Arabidopsis thaliana homolog: AT1G33810.1
Automatic updates:
Name: NM_001251313 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100500447 (LOC100500447), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:17398668..17399012 (- strand)
Length: 345
Type: three_prime_UTR
Position: Chr10:17399013..17399086 (- strand)
Length: 74
Type: CDS
Position: Chr10:17399491..17399605 (- strand)
Length: 115
Type: CDS
Position: Chr10:17400990..17401205 (- strand)
Length: 216
Type: CDS
Position: Chr10:17401206..17401283 (- strand)
Length: 78
Type: five_prime_UTR


>Vigan.10G119600.01
AACAATAACC ATAACCTAAT ATAAGAGGAT AAAAGAAGAA GTAAGAGAAT CGGGATAAGG AGAATTGAAA TTTCAGAGAT
GGCGAAGAAG GGGAAGAAGC AACTGATGTC ATCGGCGCCG TGGCGAGGCG AGGAGAGCGA AGTGATTGAA GAGGGAAAGC
TGAAAGTGAC GAGGCAGGGT GATGGCACCG CAACCATGCA CGTTCCGGCT TCCAAGTCCA ACCATCTTCA CCAGGATGAA
GATTCCATCG AAATTGATCC CGAATTACGC TACAGTTTCC AGCGCAATTT CCAGTTTCTT CAACGGGTTT TTAGCATTGA
CACTGTTGTG AAACCTCTTC CTCCTGTCAT GGCATACAAT GTCTCTCGCA ACTTGGGCTT CTTCACTCGC ATTTTCACCC
AATTTTTTGA TCCTGAAGGT ATTGCAAATG CCCAGAAATC CTTGGGCATA GGACAGGAGG ATAAAGTTCG CAAAGTTCGT
TGAAGATAAT GGGGGAAGAG ACAGAATGGG ATTCGAAAAA CTTGTCATCT ATGATTAACC TTTTTCTGAT TGATCACTTG
TGGTATTGTT TAATTCGTAA TTCAGTTATA TAGATATATT ACAAATTGAG CAGCACGACA ATTCGATCAT TTCATTATCC
TGAAAAAAAA GCTTGATCTT AGAGCATGCT GATAGTAACT CTAATCTAAT CACAATCTAG TTGTTAGTCA ACAATGAAAT
TCTCTATCGG ACGACCAAGA TGGAATATTA TTTTCAGTTA AAAAGATGAG GAAATTGATC GTTAATTATC ATCGTTTTCC
TGTCTCGAAA GAAAGGATTT TTATCCTC

>Vigan.10G119600.01
ATGGCGAAGA AGGGGAAGAA GCAACTGATG TCATCGGCGC CGTGGCGAGG CGAGGAGAGC GAAGTGATTG AAGAGGGAAA
GCTGAAAGTG ACGAGGCAGG GTGATGGCAC CGCAACCATG CACGTTCCGG CTTCCAAGTC CAACCATCTT CACCAGGATG
AAGATTCCAT CGAAATTGAT CCCGAATTAC GCTACAGTTT CCAGCGCAAT TTCCAGTTTC TTCAACGGGT TTTTAGCATT
GACACTGTTG TGAAACCTCT TCCTCCTGTC ATGGCATACA ATGTCTCTCG CAACTTGGGC TTCTTCACTC GCATTTTCAC
CCAATTTTTT GATCCTGAAG GTATTGCAAA TGCCCAGAAA TCCTTGGGCA TAGGACAGGA GGATAAAGTT CGCAAAGTTC
GTTGA

>Vigan.10G119600.01
MAKKGKKQLM SSAPWRGEES EVIEEGKLKV TRQGDGTATM HVPASKSNHL HQDEDSIEID PELRYSFQRN FQFLQRVFSI
DTVVKPLPPV MAYNVSRNLG FFTRIFTQFF DPEGIANAQK SLGIGQEDKV RKVR*