GBrowse Details

Vigan.10G126000.01

Basic Information:
Name: Vigan.10G126000.01
Multiple alignment
Variant Information
Position: Chr10:18178037..18180093 (- strand)
Length: 2057
Functional Information:
Description: Similar to Uncharacterized protein. [I1J838, Glycine max]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: Ankyrin repeat (IPR002110)
Ankyrin repeat-containing domain (IPR020683)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:21.21,34.97,20.62,26.54,24.88,29.33,17.70,25.27
Arabidopsis thaliana homolog: AT4G19150.1
Automatic updates:
Name: NM_001317439 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max putative ankyrin repeat protein RF_0381 (LOC100812821), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:18178037..18178199 (- strand)
Length: 163
Type: three_prime_UTR
Position: Chr10:18178200..18178818 (- strand)
Length: 619
Type: CDS
Position: Chr10:18179834..18179970 (- strand)
Length: 137
Type: CDS
Position: Chr10:18179971..18180093 (- strand)
Length: 123
Type: five_prime_UTR


>Vigan.10G126000.01
ATTGAAAACT TTAAAATTTT TGAAGACACC AGGAAAAGAC AGAAAATAGA GAAGGGTTGC GGAAGTAGTG TTAAAAATTC
AGAATTGACA TAACAAGGGT TTTTGGTGGC GAAAAAGGAG CAGATGGGTA ATCCACGGAG ATCGAAGACG GCGGACGACC
TTCATTCGGC GGCGAGGTCT GGGGATCTCA TCGCCGTTCA GTCAATTTTG GCTTCAAATC CTTTGGCCGT TAATTCCAGA
GATAAGCATT CCAGAACACC TCTACATTTA GCAGCATTTT CTGGGCAAGC AGAGGTAGTC ACTTATCTCT GCAAGCACAA
GGCTGATGCT GGTGCTTCTG CTATGGATGA CATGGCTGCA ATACACTTTG CTTCACAGAA GGGACATTTA GAAGTTGTTC
GAGCTCTACT TTCAGCTGGG GCCTCTCTCA AAGCATCTAC CCGCAAAGGC ATGACTTCAT TACACTATGC TGTTCAAGGT
TCCCATCTGG AGCTCGTCAA GTATTTGGCC AAGAAAGGAG CAAACCTTGC TGCCCAGACA AAGGCAGGAA AGACCCCTTT
GGATCTTGCT AACAATGGAG AAATCCGATC CTTTCTGGAG GAATTTGAGA AGTCAGCAAA GAATGGAGAA TTGGGAAAGA
AAGATAAAGA TAAAGCTGAA GAATTTGATC CCAACACATC TGAATTGGAA TTGGAATCGG AAGGTGATTT GAATGCCGAG
CCTCCTAATG CTGCTCTTGA TGAAGAAAAA AATGCAAGAG AAAAGAGAAA GGGTAATGAA GACGACGCAA GAGTAGAGTC
GTCACAACCA AAAAAGGCGA GAGTTAAGTT AAGCCATCTC CAAAGTTCAG ATGATACCCA AGAAGAAGAG AACATGTAGG
TTGGTATAGG CGCAGTAGAG CTTACATTTT GTTATTGTAA TATAGTTAAT TGTATCTGAT TTGGAATCCG TTTGTTGGGT
TACTGGACCA GACTATCTGT AGAGTATTGA TAAGAACTTA TTCTGGATTA ATACAATTTT ATCTTGATAG ATTAAATTAT
CC

>Vigan.10G126000.01
ATGGGTAATC CACGGAGATC GAAGACGGCG GACGACCTTC ATTCGGCGGC GAGGTCTGGG GATCTCATCG CCGTTCAGTC
AATTTTGGCT TCAAATCCTT TGGCCGTTAA TTCCAGAGAT AAGCATTCCA GAACACCTCT ACATTTAGCA GCATTTTCTG
GGCAAGCAGA GGTAGTCACT TATCTCTGCA AGCACAAGGC TGATGCTGGT GCTTCTGCTA TGGATGACAT GGCTGCAATA
CACTTTGCTT CACAGAAGGG ACATTTAGAA GTTGTTCGAG CTCTACTTTC AGCTGGGGCC TCTCTCAAAG CATCTACCCG
CAAAGGCATG ACTTCATTAC ACTATGCTGT TCAAGGTTCC CATCTGGAGC TCGTCAAGTA TTTGGCCAAG AAAGGAGCAA
ACCTTGCTGC CCAGACAAAG GCAGGAAAGA CCCCTTTGGA TCTTGCTAAC AATGGAGAAA TCCGATCCTT TCTGGAGGAA
TTTGAGAAGT CAGCAAAGAA TGGAGAATTG GGAAAGAAAG ATAAAGATAA AGCTGAAGAA TTTGATCCCA ACACATCTGA
ATTGGAATTG GAATCGGAAG GTGATTTGAA TGCCGAGCCT CCTAATGCTG CTCTTGATGA AGAAAAAAAT GCAAGAGAAA
AGAGAAAGGG TAATGAAGAC GACGCAAGAG TAGAGTCGTC ACAACCAAAA AAGGCGAGAG TTAAGTTAAG CCATCTCCAA
AGTTCAGATG ATACCCAAGA AGAAGAGAAC ATGTAG

>Vigan.10G126000.01
MGNPRRSKTA DDLHSAARSG DLIAVQSILA SNPLAVNSRD KHSRTPLHLA AFSGQAEVVT YLCKHKADAG ASAMDDMAAI
HFASQKGHLE VVRALLSAGA SLKASTRKGM TSLHYAVQGS HLELVKYLAK KGANLAAQTK AGKTPLDLAN NGEIRSFLEE
FEKSAKNGEL GKKDKDKAEE FDPNTSELEL ESEGDLNAEP PNAALDEEKN AREKRKGNED DARVESSQPK KARVKLSHLQ
SSDDTQEEEN M*