GBrowse Details

Vigan.10G133400.01

Basic Information:
Name: Vigan.10G133400.01
Multiple alignment
Variant Information
Position: Chr10:19011004..19013956 (- strand)
Length: 2953
Functional Information:
Description: Similar to Abscisic acid 8'-hydroxylase. [Q0H212, Phaseolus vulgaris]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: iron ion binding (GO:0005506)
Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705)
Molecular Function: heme binding (GO:0020037)
InterPro: Cytochrome P450 (IPR001128)
Cytochrome P450, E-class, group I (IPR002401)
Cytochrome P450, conserved site (IPR017972)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.00,0.80,6.89,6.08,38.63,0.65,81.62,3.25
Arabidopsis thaliana homolog: AT2G29090.1, AT3G19270.1, AT4G19230.2, AT5G45340.1
Automatic updates:
Name: NM_001250561 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max abscisic acid 8'-hydroxylase (LOC100170674), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:19011004..19011423 (- strand)
Length: 420
Type: three_prime_UTR
Position: Chr10:19011424..19011520 (- strand)
Length: 97
Type: CDS
Position: Chr10:19011607..19011725 (- strand)
Length: 119
Type: CDS
Position: Chr10:19011809..19011915 (- strand)
Length: 107
Type: CDS
Position: Chr10:19012032..19012206 (- strand)
Length: 175
Type: CDS
Position: Chr10:19012457..19012843 (- strand)
Length: 387
Type: CDS
Position: Chr10:19013051..19013366 (- strand)
Length: 316
Type: CDS
Position: Chr10:19013458..19013660 (- strand)
Length: 203
Type: CDS
Position: Chr10:19013661..19013956 (- strand)
Length: 296
Type: five_prime_UTR


>Vigan.10G133400.01
ATACACTCTA GTGACACGTG CTGTCTGTTT CTCTCTCTTG ATGAGAGAAA TAAAATAGAG GAAAAACATG AATGAGCTGG
AGGGAGATTC CGTGTGTGGA AATCGAGCTG TAATTGAAAG CCTCCCTTCT TTTTCCCTCC TTCCCTCCCT CTTCCTGCTT
CATATGCTTC CACTCCATTC AACAGCCTAT AAATACCTCA AATCATCACC TTCTTTTCTC ACACAACATC TTCTCGTTCT
TCTTATTCTT TAAGATCCTT CACTTCACCT GTTACAACCA ATCACACTCA TAAAACATGG AACTAACCAC AATCTTATGC
TTCTCTGCTG TTACCTTTCT CTTCATTCTT TTTCTCTTCA GGACACTCAT CAACCCCTTT GTCTCCAAAC GCCCTGACTT
ACCACTCCCA CCTGGGACCA TGGGCTGGCC TTATATAGGA GAAACCTTTC AAATGTATTC TCAAGACCCA AATGTCTTCT
TTGCCTCCAA AATCAAAAGG TATGGCTCTA TGTTCAAGTC CCACATTCTG GGATGTCCCT GTGTGATGAT TTCCAGCTCC
GAGGCTGCCA AGTTTGTGCT CAACAAAGCT CAGCTGTTCA AGCCAACATT CCCAGCTAGC AAAGAGAGGA TGTTGGGAAA
ACAAGCTATC TTCTTTCACC AAGGAGAGTA CCATGCTAAC TTGAGACGGC TTGTTCTTCG CACCTTCATG CCAGAAGCCA
TAAAAAACAT CGTCCCAGAC ATTGAATCCA TTGCCCAAGA TTGCTTAAAA TCCTGGGGAG GCCGCTTGAT CACCACTTTC
CTTGAAATGA AAACGTTCAC CTTCAACGTT GCCCTGCTTT CAATTTTCGG GAAAGAAGAG ATTCTGTACA GAGATGCTCT
GAAACGGTGC TACTACACTC TGGAGCAAGG GTACAACTCA ATGCCCATTA ACGTTCCGGG GACACTGTTC CACAAGGCGA
TGAAAGCGAG AAAGGAGCTT GCACAGATCT TGGCCCAAAT AATCTCTAGC AGGAGGCAGA GGAAACAGGA TTACAAGGAC
TTGTTGGGTT CGTTCATGGG AGAGAAAGCA GGGCTCACCG ACGAGCAGAT AGCAGATAAT GTAATTGGCG TCATTTTTGC
AGCTCGTGAT ACCACGGCCA GTGTGCTGAC GTGGATTGTC AAGTACCTTG GTGAAAACCC CAGTGTCCTA GAAGCTGTTA
CTGAGGAACA AGAGTGCATA TTGAAGAGCA AGGAAGAAAG TGGAGAGGAT AAGGGTCTGA ATTGGGAAGA TACCAAAAAG
ATGCCAATAA CTTCAAGGGT TATTCAGGAA ACACTAAGAG TTGCTTCAAT TTTGTCTTTT ACTTTCAGAG AGGCAGTAGA
AGACGTTGAA TATCAAGGGT ATCTCATACC AAAAGGGTGG AAAGTGCTAC CTCTATTTAG GAACATACAC CACAGTCCAG
AGAACTTCAA GGAGCCAGAA AAATTTGAAC CCTCAAGATT TGAGGCTGCA CCAAAACCCA ATACATTTAT GCCATTTGGG
AGTGGGATCC ACGCTTGTCC AGGGAATGAA CTGGCCAAGT TGGAGATTTT GGTCCTCCTA CATCATCTCA CCACAAAGTT
CAGGTGGTCT GTTGTGGATG CAAAGAATGG GATTCAATAT GGCCCTTTTG CTCTTCCCCA AAATGGTTTA CCCATCACAC
TATATCCCAA GAAGAAGTAG AAGTAGTAGA TACTAAATAT CATCATCACT CAAACAAATC ACACATCCAA CATCCTGGTT
TCATAGTAGC TTTCTAAATA TGGAAAGAAC GAATGCCTTC ACAACTCTCA GAATTGGTTT CCACAGTCTC CACATATATA
GTTCAAAGAC AGAGACCGTA TTGCAATTGG ATAACCAAAC AAGGGTGATC AACAACTCTT CCCTTCTTTT TGGCCAAGAG
AAACCCAAAG GGGTAGTCTT GGCAATAATA ACATACAACA CAGGGATGTC AACTGTACAT AGGAGGTTTC ACAGCCAGGT
CCAGATCATA GTATTATTAT TATCTTCTTT TCTTTATTAT TTTTTCTCCT TCAAATATCA CCAAAACTCC TCACCATATT
ATTGTATTCA TCCATTCAAC TAATTATTAC TTCTGTATCC 

>Vigan.10G133400.01
ATGGAACTAA CCACAATCTT ATGCTTCTCT GCTGTTACCT TTCTCTTCAT TCTTTTTCTC TTCAGGACAC TCATCAACCC
CTTTGTCTCC AAACGCCCTG ACTTACCACT CCCACCTGGG ACCATGGGCT GGCCTTATAT AGGAGAAACC TTTCAAATGT
ATTCTCAAGA CCCAAATGTC TTCTTTGCCT CCAAAATCAA AAGGTATGGC TCTATGTTCA AGTCCCACAT TCTGGGATGT
CCCTGTGTGA TGATTTCCAG CTCCGAGGCT GCCAAGTTTG TGCTCAACAA AGCTCAGCTG TTCAAGCCAA CATTCCCAGC
TAGCAAAGAG AGGATGTTGG GAAAACAAGC TATCTTCTTT CACCAAGGAG AGTACCATGC TAACTTGAGA CGGCTTGTTC
TTCGCACCTT CATGCCAGAA GCCATAAAAA ACATCGTCCC AGACATTGAA TCCATTGCCC AAGATTGCTT AAAATCCTGG
GGAGGCCGCT TGATCACCAC TTTCCTTGAA ATGAAAACGT TCACCTTCAA CGTTGCCCTG CTTTCAATTT TCGGGAAAGA
AGAGATTCTG TACAGAGATG CTCTGAAACG GTGCTACTAC ACTCTGGAGC AAGGGTACAA CTCAATGCCC ATTAACGTTC
CGGGGACACT GTTCCACAAG GCGATGAAAG CGAGAAAGGA GCTTGCACAG ATCTTGGCCC AAATAATCTC TAGCAGGAGG
CAGAGGAAAC AGGATTACAA GGACTTGTTG GGTTCGTTCA TGGGAGAGAA AGCAGGGCTC ACCGACGAGC AGATAGCAGA
TAATGTAATT GGCGTCATTT TTGCAGCTCG TGATACCACG GCCAGTGTGC TGACGTGGAT TGTCAAGTAC CTTGGTGAAA
ACCCCAGTGT CCTAGAAGCT GTTACTGAGG AACAAGAGTG CATATTGAAG AGCAAGGAAG AAAGTGGAGA GGATAAGGGT
CTGAATTGGG AAGATACCAA AAAGATGCCA ATAACTTCAA GGGTTATTCA GGAAACACTA AGAGTTGCTT CAATTTTGTC
TTTTACTTTC AGAGAGGCAG TAGAAGACGT TGAATATCAA GGGTATCTCA TACCAAAAGG GTGGAAAGTG CTACCTCTAT
TTAGGAACAT ACACCACAGT CCAGAGAACT TCAAGGAGCC AGAAAAATTT GAACCCTCAA GATTTGAGGC TGCACCAAAA
CCCAATACAT TTATGCCATT TGGGAGTGGG ATCCACGCTT GTCCAGGGAA TGAACTGGCC AAGTTGGAGA TTTTGGTCCT
CCTACATCAT CTCACCACAA AGTTCAGGTG GTCTGTTGTG GATGCAAAGA ATGGGATTCA ATATGGCCCT TTTGCTCTTC
CCCAAAATGG TTTACCCATC ACACTATATC CCAAGAAGAA GTAG

>Vigan.10G133400.01
MELTTILCFS AVTFLFILFL FRTLINPFVS KRPDLPLPPG TMGWPYIGET FQMYSQDPNV FFASKIKRYG SMFKSHILGC
PCVMISSSEA AKFVLNKAQL FKPTFPASKE RMLGKQAIFF HQGEYHANLR RLVLRTFMPE AIKNIVPDIE SIAQDCLKSW
GGRLITTFLE MKTFTFNVAL LSIFGKEEIL YRDALKRCYY TLEQGYNSMP INVPGTLFHK AMKARKELAQ ILAQIISSRR
QRKQDYKDLL GSFMGEKAGL TDEQIADNVI GVIFAARDTT ASVLTWIVKY LGENPSVLEA VTEEQECILK SKEESGEDKG
LNWEDTKKMP ITSRVIQETL RVASILSFTF REAVEDVEYQ GYLIPKGWKV LPLFRNIHHS PENFKEPEKF EPSRFEAAPK
PNTFMPFGSG IHACPGNELA KLEILVLLHH LTTKFRWSVV DAKNGIQYGP FALPQNGLPI TLYPKKK*