GBrowse Details

Vigan.10G137200.01

Basic Information:
Name: Vigan.10G137200.01
Multiple alignment
Variant Information
Position: Chr10:19414601..19422193 (+ strand)
Length: 7593
Functional Information:
Description: Similar to Uncharacterized protein. [K7K424, Glycine max]
GO: Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747)
InterPro: Diacylglycerol acyltransferase (IPR007130)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.26,0.26,3.95,3.21,1.73,0.11,2.09,3.76
Arabidopsis thaliana homolog: AT3G51520.1
Automatic updates:
Name: LC533834 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max cv. Jidadou5 GmDGAT2D mRNA for diacylglycerol O-acyltransferase 2D, complete cds.
PubMed ID: -
Status: Known Variant
Name: NM_001312657 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max diacylglycerol O-acyltransferase 2-like (LOC100784657), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:19414601..19414825 (+ strand)
Length: 225
Type: five_prime_UTR
Position: Chr10:19414826..19415007 (+ strand)
Length: 182
Type: CDS
Position: Chr10:19415089..19415163 (+ strand)
Length: 75
Type: CDS
Position: Chr10:19415237..19415322 (+ strand)
Length: 86
Type: CDS
Position: Chr10:19416425..19416531 (+ strand)
Length: 107
Type: CDS
Position: Chr10:19416620..19416775 (+ strand)
Length: 156
Type: CDS
Position: Chr10:19417737..19417823 (+ strand)
Length: 87
Type: CDS
Position: Chr10:19419846..19419943 (+ strand)
Length: 98
Type: CDS
Position: Chr10:19420965..19421052 (+ strand)
Length: 88
Type: CDS
Position: Chr10:19421817..19421918 (+ strand)
Length: 102
Type: CDS
Position: Chr10:19421919..19422193 (+ strand)
Length: 275
Type: three_prime_UTR


>Vigan.10G137200.01
CAGCGCCAGC GTAACTGAAC CTTTTGCACG TTTTCTTCGT TACCACCAAC TGATTGTTTA ACTGAAATCA CGTGACGAAG
CCAAACTGTC GTTTTATACT TCACACCTCT GCACTTTCAA CAATTTCATA AGGCTCCTAT CTCATGTTTC CATCACCCAT
CAGCGTGCTT GTGCACTCTG TTACTCCAAA CGACGCCGTT CCCTCACACC CTCGGAGCTC GGACCATGGC GGCCATTGAC
GACGGAGGCA AGGCGGAGAA ATTCATCAGT GGGAGAGAAG AATTCGGCAA CTCATCCAAC ACGTTCAGCG CGATTCTAGC
GATGGCGCTG TGGCTGGGAG CCATTCACTT CAACATTGCC CTCATCCTCT TCGCCCTCTT CTTCCTTCCT CTCCCCAAAT
TACTGTTGGT TTTTGGTTTT CTGTTTGTGT TTGCAGTGCT TCCTATCGAC GAGAAGAGCA GATTTGGCCG AACATTGTCG
AGGTTCATTT GCAAACACGC TTGCAATTAT TTTCCCATCA CGCTTCACGT AGAGGATATG AACGCCTTTG ATCCGAACCG
TGCTTATGTT TTTGGTTATG AACCACATTC GGTTTTGCCA ATTGGCATTG TGGCACTAGC TGACCACACT GGTTTCATGC
CTCTTCCAAA AGTTAGAGTT CTTGCTAGCA GCACGGTGTT CTACACACCA TTTTTGAGAC ACATATGGAC ATGGTTGGGT
CTTACACCAG CAACAAAGAA AAACTTTATC TCCTTGCTAG CGTCTGGCCA TAGTTGCATT TTAACACCTG GTGGAGTGCA
AGAGACATTC CTCATGCAAC ATGGCATTGA GATTGTTTTC CTTAAGGCAC GAAGAGGATT TGTCCGCATA TCAATGGTGA
AAGGCCTACC TTTGGTTCCA GTTTTCTGCT TCGGTCAGTC AAATGTCTAT AAGTGGTGGA AACCAGGTGG GAAGTTCTTC
CTGAAAGTTG CAAGAGCTAT CAAATTCACC CCAATATGTT TTTGGGGAAT TTTCGGATCT CCATTACCGT TCAGATACCC
AATGCATGTG GTGGTGGGAA GACCAATTGA GCTCACCAAA AACCCCAACC CAACCACCGA GGAGGTTGCC AAGATACATA
GTAAGTTTGT GGAAGCACTT CAAGATCTCT TTGAAAGGCA CAAAGCTCCT GCTGGCTATC CAAACCTTGA ATTAAAAATT
GTTTGAACTA GGCCTTAATA TTGTACCATA TTTTCAATGG TTTTTTATTT ATTATTTTTT TGGGATGGAG TTGGTAAATG
TAAGTTAGGC TATAAATTGC TAGTAATACG AACAACTACC ATCTTGGGAA TAAAATTGAT GAATAAAGGG AAATGAGGGA
GTAGCTATCT TTTCAATATT GCATATTAAC TGGTTGTAAA CCGCATAACT GCCTATTTAT AGCTTATAAA TAGAAATAGA
GCTCAAATTC TGTATGTAGA TTGTAACAAA CTATTGTATT C

>Vigan.10G137200.01
ATGGCGGCCA TTGACGACGG AGGCAAGGCG GAGAAATTCA TCAGTGGGAG AGAAGAATTC GGCAACTCAT CCAACACGTT
CAGCGCGATT CTAGCGATGG CGCTGTGGCT GGGAGCCATT CACTTCAACA TTGCCCTCAT CCTCTTCGCC CTCTTCTTCC
TTCCTCTCCC CAAATTACTG TTGGTTTTTG GTTTTCTGTT TGTGTTTGCA GTGCTTCCTA TCGACGAGAA GAGCAGATTT
GGCCGAACAT TGTCGAGGTT CATTTGCAAA CACGCTTGCA ATTATTTTCC CATCACGCTT CACGTAGAGG ATATGAACGC
CTTTGATCCG AACCGTGCTT ATGTTTTTGG TTATGAACCA CATTCGGTTT TGCCAATTGG CATTGTGGCA CTAGCTGACC
ACACTGGTTT CATGCCTCTT CCAAAAGTTA GAGTTCTTGC TAGCAGCACG GTGTTCTACA CACCATTTTT GAGACACATA
TGGACATGGT TGGGTCTTAC ACCAGCAACA AAGAAAAACT TTATCTCCTT GCTAGCGTCT GGCCATAGTT GCATTTTAAC
ACCTGGTGGA GTGCAAGAGA CATTCCTCAT GCAACATGGC ATTGAGATTG TTTTCCTTAA GGCACGAAGA GGATTTGTCC
GCATATCAAT GGTGAAAGGC CTACCTTTGG TTCCAGTTTT CTGCTTCGGT CAGTCAAATG TCTATAAGTG GTGGAAACCA
GGTGGGAAGT TCTTCCTGAA AGTTGCAAGA GCTATCAAAT TCACCCCAAT ATGTTTTTGG GGAATTTTCG GATCTCCATT
ACCGTTCAGA TACCCAATGC ATGTGGTGGT GGGAAGACCA ATTGAGCTCA CCAAAAACCC CAACCCAACC ACCGAGGAGG
TTGCCAAGAT ACATAGTAAG TTTGTGGAAG CACTTCAAGA TCTCTTTGAA AGGCACAAAG CTCCTGCTGG CTATCCAAAC
CTTGAATTAA AAATTGTTTG A

>Vigan.10G137200.01
MAAIDDGGKA EKFISGREEF GNSSNTFSAI LAMALWLGAI HFNIALILFA LFFLPLPKLL LVFGFLFVFA VLPIDEKSRF
GRTLSRFICK HACNYFPITL HVEDMNAFDP NRAYVFGYEP HSVLPIGIVA LADHTGFMPL PKVRVLASST VFYTPFLRHI
WTWLGLTPAT KKNFISLLAS GHSCILTPGG VQETFLMQHG IEIVFLKARR GFVRISMVKG LPLVPVFCFG QSNVYKWWKP
GGKFFLKVAR AIKFTPICFW GIFGSPLPFR YPMHVVVGRP IELTKNPNPT TEEVAKIHSK FVEALQDLFE RHKAPAGYPN
LELKIV*