GBrowse Details

Vigan.10G140800.01

Basic Information:
Name: Vigan.10G140800.01
Multiple alignment
Variant Information
Position: Chr10:19875529..19880652 (+ strand)
Length: 5124
Functional Information:
Description: Similar to Uncharacterized protein. [I1J8C1, Glycine max]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: protein serine/threonine kinase activity (GO:0004674)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
Serine/threonine- / dual specificity protein kinase, catalytic domain (IPR002290)
Serine/threonine-protein kinase, active site (IPR008271)
Protein kinase-like domain (IPR011009)
Protein kinase, ATP binding site (IPR017441)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:9.35,8.03,8.89,6.05,7.12,3.15,7.07,11.36
Arabidopsis thaliana homolog: AT2G17530.1, AT4G35500.2
Automatic updates:
Name: NM_001255203 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max serine/threonine-protein kinase SRPK2-like protein (LOC100784192), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:19875529..19876840 (+ strand)
Length: 1312
Type: five_prime_UTR
Position: Chr10:19876841..19877023 (+ strand)
Length: 183
Type: CDS
Position: Chr10:19878072..19878857 (+ strand)
Length: 786
Type: CDS
Position: Chr10:19879966..19880013 (+ strand)
Length: 48
Type: CDS
Position: Chr10:19880093..19880404 (+ strand)
Length: 312
Type: CDS
Position: Chr10:19880405..19880652 (+ strand)
Length: 248
Type: three_prime_UTR


>Vigan.10G140800.01
GTCAACTTAT CAATTATAAA TTAATTTATC ACTTATAAAA AAAGTTATAA ATTAGTTTTA CGAGAAATGC TGCAAATAAA
AGTCTATAAT GCATAACATA ACATGTTCTC TAACACTGAC AACAAAACAT ATTCTCTCTG CACTCATGAT GTTACTTATG
CATTTAGCTT TTCATGCCAT TTTCAGCTTT TAGGTCCATC AATTTAAAAA AAAACTACAA ATGATTTTAT TTTTAACCAT
ACCAATCTGC TTCCAATTTA TTCCACTACA TTTTACTGTC ACATTAATTG CCAGCTTCAT AGGTATATGA GATCTTAAAA
GGGAAAAAGA ATGACTGATA AAGTTTAAGA ACTTAGCATC AGTGAATCAA TTCAGCTACA AAGACCACAA CATTAAAATG
GAAAAGTTAA TGAAACACTT TGAATGGAGT AGCTGTTTTT CTGAGACAGT CATGCCATGT GCTAGTGTGA TCCTCCTCAG
TCATATCTAG AGATGCTTTA TGTTAGAGAG GAAGTATAGT AGAGAGGTTT TAAATTAATG CTTGAAAGGT GTTTGAATAA
ATTCATAAAT GAGAAGAATA ATAAGCACAA GATACACTTT CTAAGTAAGT AGCATTACAA AAAGTAAGAA AATACATGAA
TTTTTAGTTC AACATATTGA TGGCACATTA GACTAACAAG TCAAATCAAA TCTACGCAAA ATAAAACCGA ATAAATAAAC
CGAGACTTTT AAGATTTACT ACTAAATTAA CTCATGAAAT TATTAGTTGT AGGAGTGATT AAGCAGGTCA TTACCTAGGA
ACCCTAGAAA AACAAAGAAA GAAACAAACC ATAAAGACAT ACATTAAAAA AAAAAGGTGC ATGATGTTGG AAATGACAGA
AGCCCACAAA GCTGTTTCAG AGTATGATTG CTCCACCTCA CTTGGAAACA GACAGTTGAA ATTATGGAAT CCCGAAAATA
GTCAATGACA GAGGTAAACC AACCAAGGAA AACGAAGGGC ATAGAGGGAA TGATAAAGAC GATGGGCTAT GAAATTGGAG
TAGGAAAAAT GGAAGACCCA CACATCACAT GAAGAAAGAA AGAGAAAAAA GTGGAGGAAT AAGGAATAGG AATTGCATCC
TCCTAAACAA AAGCCTCACA CACCGCAAAT ATAATAACGC TTCATCCTCC TAAACAAAGA CTTCGCGTCC AAGCAATTTC
CGAGTTAAAG AAGATATATC AAAAGGGGAA AGCAGAGCGA ATCACTGGAG AATTTTCAAG AAAGAATCAG ATTTTGAGTT
TCTTTTGGTG AATCTGAATA GATCAGAAGG TGATGTCGTG TTCGTCGTCG TCGGGGTCGG AGGAAGACGA TGAGGGATTC
GACTCTTACC GGAAAGGAGG TTACCACGCC GTCAGAGTCG GCGATCAGTT CGGCGGCGGC AGGTACATAG CGCAGAGGAA
ACTGGGTTGG GGTCAGTTCT CCACCGTCTG GCTTGCTTAC GATACTAAAA CTTCCTCATT TGTTGCTCTC AAGATCCAGA
AAAGTGCCGC CGAGTTTGTT CAGGCTGCCC TTCATGAGAT TGATATTCTT TCATCCATTG CTGACCATGA CCCATCAAAT
TCAAAATTTG TGATTCAATT GATTGACAAC TTTAAGCACA CTGGTCCAAA TGGGCAGCAT CTTTGCATGG TCCTGGGGTT
TCTTGGCGAT AGTTTGCTTC GCTTGATCAA ATATAACCGT TACAAAGGCC TTCCATTGAA TAAAGTTAGA GAGATTTGCA
AATGCGTTTT AATTGGTTTG AACTACTTGC ATACTGATCT TGGTATAATC CACTCTGACC TAAAACCTGA AAACATTCTT
CTATGTTCAA CCATTGATCC TGCCAAAGAC CCTTTAAGAT CTGGACTCTC TCCAATTCTA GAGCGACCTG AGGGAAACAC
AAATGGTGGA GTATCAAGTC TTATTGAGAA AAGGTTGAAA AGGAGAGCAA GGTCGGCAGT TGCTAAGATA TCCGGAAGGA
GAGGGTCAAT GGGAGGAACA GAAGATGTTG CAAAGACCGG TAGAAACATT AATGGGATTG ATGTGAGATG CAAGATAGTA
GATTTTGGAA ATGCTTGTTG GGCTGAGAAG CAGTTTGCAG AAGAAATACA GACAAGACAG TACAGAGCAC CTGAAGTTGT
ACTGATATCT GGCTATTCTT TCCCTGTTGA CATGTGGTCT TTTGCTTGCA TAGCTTTTGA ACTAGCCACT GGAGATATGT
TGTTTACACC AAAGGGTGGA CAAGGTTTTA GTGAGGATGA GGATCACCTC GCCCTGATGA TGGAACTCCT TGGAAAGATG
CCCCGGAAGA TTGCTATTGG TGGAGCTCAG TCCAAGGATT ACTTTGACAG GCATGGGGAT CTAAAAAGGA TTCGAAGGCT
AAAATTCTGT CCACTAGACA AATTGCTGAC TGATAAATAT AAATTTTCAG TTAATGATGC TCAAGAGTTT TCAGAATTTC
TTCTACCACT CTTTGATTTT GCCCCTGAGA AGCGACCAAC TGCGAGACAG TGCCTGGAAC ATCCATGGCT GAAGTGCATG
GAGTCCCCTC CAAATCAAAC TGCTGAGGAA AAAGTGCATG TTGGAATGAG CAACCTTAAA ATCTCACAGT CCAAGGCATA
GTCACATCAC ATCTTTAAGC CCCTCCTTCC ACATGAACTA TTGATTGTGA TATTATTATT TTTTGTTAAA CTTCAATAAG
ATTCTTTCTA TTGGATTATT AACTTCAAAG ATGTAAATCA GTAAAGAATT TTGTTCCTCC ACAGATATCT GACACCAGAA
TTTGCCTGTA TACTGTTCAT ATATGTTGTA AGTCATGACA TCATATGACT TTAATTCAAG TCTTAGCTTT TCCTTTAATC
TGAATTTGG

>Vigan.10G140800.01
ATGTCGTGTT CGTCGTCGTC GGGGTCGGAG GAAGACGATG AGGGATTCGA CTCTTACCGG AAAGGAGGTT ACCACGCCGT
CAGAGTCGGC GATCAGTTCG GCGGCGGCAG GTACATAGCG CAGAGGAAAC TGGGTTGGGG TCAGTTCTCC ACCGTCTGGC
TTGCTTACGA TACTAAAACT TCCTCATTTG TTGCTCTCAA GATCCAGAAA AGTGCCGCCG AGTTTGTTCA GGCTGCCCTT
CATGAGATTG ATATTCTTTC ATCCATTGCT GACCATGACC CATCAAATTC AAAATTTGTG ATTCAATTGA TTGACAACTT
TAAGCACACT GGTCCAAATG GGCAGCATCT TTGCATGGTC CTGGGGTTTC TTGGCGATAG TTTGCTTCGC TTGATCAAAT
ATAACCGTTA CAAAGGCCTT CCATTGAATA AAGTTAGAGA GATTTGCAAA TGCGTTTTAA TTGGTTTGAA CTACTTGCAT
ACTGATCTTG GTATAATCCA CTCTGACCTA AAACCTGAAA ACATTCTTCT ATGTTCAACC ATTGATCCTG CCAAAGACCC
TTTAAGATCT GGACTCTCTC CAATTCTAGA GCGACCTGAG GGAAACACAA ATGGTGGAGT ATCAAGTCTT ATTGAGAAAA
GGTTGAAAAG GAGAGCAAGG TCGGCAGTTG CTAAGATATC CGGAAGGAGA GGGTCAATGG GAGGAACAGA AGATGTTGCA
AAGACCGGTA GAAACATTAA TGGGATTGAT GTGAGATGCA AGATAGTAGA TTTTGGAAAT GCTTGTTGGG CTGAGAAGCA
GTTTGCAGAA GAAATACAGA CAAGACAGTA CAGAGCACCT GAAGTTGTAC TGATATCTGG CTATTCTTTC CCTGTTGACA
TGTGGTCTTT TGCTTGCATA GCTTTTGAAC TAGCCACTGG AGATATGTTG TTTACACCAA AGGGTGGACA AGGTTTTAGT
GAGGATGAGG ATCACCTCGC CCTGATGATG GAACTCCTTG GAAAGATGCC CCGGAAGATT GCTATTGGTG GAGCTCAGTC
CAAGGATTAC TTTGACAGGC ATGGGGATCT AAAAAGGATT CGAAGGCTAA AATTCTGTCC ACTAGACAAA TTGCTGACTG
ATAAATATAA ATTTTCAGTT AATGATGCTC AAGAGTTTTC AGAATTTCTT CTACCACTCT TTGATTTTGC CCCTGAGAAG
CGACCAACTG CGAGACAGTG CCTGGAACAT CCATGGCTGA AGTGCATGGA GTCCCCTCCA AATCAAACTG CTGAGGAAAA
AGTGCATGTT GGAATGAGCA ACCTTAAAAT CTCACAGTCC AAGGCATAG

>Vigan.10G140800.01
MSCSSSSGSE EDDEGFDSYR KGGYHAVRVG DQFGGGRYIA QRKLGWGQFS TVWLAYDTKT SSFVALKIQK SAAEFVQAAL
HEIDILSSIA DHDPSNSKFV IQLIDNFKHT GPNGQHLCMV LGFLGDSLLR LIKYNRYKGL PLNKVREICK CVLIGLNYLH
TDLGIIHSDL KPENILLCST IDPAKDPLRS GLSPILERPE GNTNGGVSSL IEKRLKRRAR SAVAKISGRR GSMGGTEDVA
KTGRNINGID VRCKIVDFGN ACWAEKQFAE EIQTRQYRAP EVVLISGYSF PVDMWSFACI AFELATGDML FTPKGGQGFS
EDEDHLALMM ELLGKMPRKI AIGGAQSKDY FDRHGDLKRI RRLKFCPLDK LLTDKYKFSV NDAQEFSEFL LPLFDFAPEK
RPTARQCLEH PWLKCMESPP NQTAEEKVHV GMSNLKISQS KA*