GBrowse Details

Vigan.10G146800.01

Basic Information:
Name: Vigan.10G146800.01
Multiple alignment
Variant Information
Position: Chr10:20570431..20572464 (- strand)
Length: 2034
Functional Information:
Description: Similar to Uncharacterized protein. [G7JYT7, Medicago truncatula]
InterPro: CRAL-TRIO domain (IPR001251)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:229.42,30.73,49.13,51.26,23.63,106.88,42.10,20.86
Arabidopsis thaliana homolog: AT4G35750.1
Automatic updates:
Name: NM_001248110 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max SEC14 superfamily protein (LOC100499974), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001254423 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max Sec14p-like lipid-binding domain-containing protein (LOC100818380), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:20570431..20570678 (- strand)
Length: 248
Type: three_prime_UTR
Position: Chr10:20570679..20570901 (- strand)
Length: 223
Type: CDS
Position: Chr10:20571550..20571814 (- strand)
Length: 265
Type: CDS
Position: Chr10:20571918..20572041 (- strand)
Length: 124
Type: CDS
Position: Chr10:20572042..20572464 (- strand)
Length: 423
Type: five_prime_UTR


>Vigan.10G146800.01
TAATAAGTGA ATTAAGCAAC GATAATTATG GAGGAAGCCT GGTTTCTCCA CGAATCATGA TGAAGGAACC TACGGCTGAG
ATTGCGTGTG GATAGTGTGG GCCCATGGTA CTCTGAAAAA GGAAGATACC TTCGAATATT CCTAGGCCGC GAAACTGCAG
CAAGCTTGTG TTGCTTTCAA TTTTTATTTT GAATTTTATT TATAATTAAT AATATTCCAA TCCCTTATTT TCTCTTTCTA
ACACTCCTTA TTTGTGTTTC TTTTATCCAT AATCAAATAA TTAAGTTCTG TTTGTCCCTT ATCTTGCATC CCTTATAATG
CCTTCCATCA TTCTCTTCTA CACCATCACA ATCAATTTCT CTTATCCATT CTCTAATTTT TCTTCTTCCA CTCCGATTTT
CTCTCTTTCT CTATAAACCA AACATGTGCG CGCCCATATC CGAACTCGAA CAGGAAGAGC TGCTCGAAAA ACTAGAGGTT
TTCAAGATCA AAGGCCGTGA CAAGCATGGC CGCAAGATCC TTCGCATTAT CGGAAAATTC TTCCCAGCGC GGTTGATCAC
TGTTGAGGTG CTGAAGAGGT ACCTGGAAGA GAGGGTTTTC CCGAAGCTGG GGAAGAGAAA ATTCGCAGTG CTCTACGTGC
ACACCGACGT CCAGAGAAGC GAGAATTTGC CCGGAATATC CGCTCTCCGG TCGATCTACG ACGCGATTCC GGCCAACGTG
AAGGAGAATC TCGAAGCTTT TTATTTTATT CATCCGGGCT TACAGGCCCG CCTTTTCCTT GCTACCTTGG GCCGCTTCCT
CTTCAACGCT GGGCTGTATG GAAAGTTGAA GTACATTAGC AGGGTTGATT TTCTGTGGGA GCACGTGAAG AGGAACGAGG
TGGAGATTCC GGAGTTTGTG TTTGATCATG ACGAGGATTT GGAGTACCGT CCGATGATGG ATTACGGGTT AGAGAGTGAT
CACGCCAGAG TGTACGGTGG TGCTCCCACT ATGGATTCAC CAGTGACCAC CTATTCCATG AGGTGCATCT CATAGGATTC
CACCTCCAGA AGATTGAACA ATCCGTGATG CCTTGTTTTG TGGGTTAGGT AGACTGGGCC TTGCAGTTAG TTAAATAGGC
CCATAGTTAT GTGGATGTTG ATAATGTGTA GAAAAAAGAA AAGAAAGAAA GAAAAGAATA GTCGCTTTTT AGGTTTTGCT
AATGTGGTAA TACTTATCAA ATAGCATTTT CAGTTTTGCT TGGATGATTG AGATCAATGA TATTAAAAAG AATTCCACCG
ACT

>Vigan.10G146800.01
ATGTGCGCGC CCATATCCGA ACTCGAACAG GAAGAGCTGC TCGAAAAACT AGAGGTTTTC AAGATCAAAG GCCGTGACAA
GCATGGCCGC AAGATCCTTC GCATTATCGG AAAATTCTTC CCAGCGCGGT TGATCACTGT TGAGGTGCTG AAGAGGTACC
TGGAAGAGAG GGTTTTCCCG AAGCTGGGGA AGAGAAAATT CGCAGTGCTC TACGTGCACA CCGACGTCCA GAGAAGCGAG
AATTTGCCCG GAATATCCGC TCTCCGGTCG ATCTACGACG CGATTCCGGC CAACGTGAAG GAGAATCTCG AAGCTTTTTA
TTTTATTCAT CCGGGCTTAC AGGCCCGCCT TTTCCTTGCT ACCTTGGGCC GCTTCCTCTT CAACGCTGGG CTGTATGGAA
AGTTGAAGTA CATTAGCAGG GTTGATTTTC TGTGGGAGCA CGTGAAGAGG AACGAGGTGG AGATTCCGGA GTTTGTGTTT
GATCATGACG AGGATTTGGA GTACCGTCCG ATGATGGATT ACGGGTTAGA GAGTGATCAC GCCAGAGTGT ACGGTGGTGC
TCCCACTATG GATTCACCAG TGACCACCTA TTCCATGAGG TGCATCTCAT AG

>Vigan.10G146800.01
MCAPISELEQ EELLEKLEVF KIKGRDKHGR KILRIIGKFF PARLITVEVL KRYLEERVFP KLGKRKFAVL YVHTDVQRSE
NLPGISALRS IYDAIPANVK ENLEAFYFIH PGLQARLFLA TLGRFLFNAG LYGKLKYISR VDFLWEHVKR NEVEIPEFVF
DHDEDLEYRP MMDYGLESDH ARVYGGAPTM DSPVTTYSMR CIS*