GBrowse Details

Vigan.10G148700.01

Basic Information:
Name: Vigan.10G148700.01
Multiple alignment
Variant Information
Position: Chr10:20764235..20767805 (+ strand)
Length: 3571
Functional Information:
Description: Similar to Uncharacterized protein. [I1LI46, Glycine max]
GO: Biological Process: response to oxidative stress (GO:0006979)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: peroxidase activity (GO:0004601)
Molecular Function: heme binding (GO:0020037)
InterPro: Plant peroxidase (IPR000823)
Haem peroxidase, plant/fungal/bacterial (IPR002016)
Haem peroxidase (IPR010255)
Peroxidases heam-ligand binding site (IPR019793)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.70,1.29,4.11,4.72,1.28,57.84,11.56,38.34
Arabidopsis thaliana homolog: AT5G42180.1
Automatic updates:
Name: NM_001317618 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max peroxidase sEPb2 (SEPB2), mRNA.
PubMed ID: -
Status: Known Variant
Name: U51193 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max peroxidase (sEPb1) mRNA, partial cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:20764235..20765297 (+ strand)
Length: 1063
Type: five_prime_UTR
Position: Chr10:20765298..20765501 (+ strand)
Length: 204
Type: CDS
Position: Chr10:20765609..20765797 (+ strand)
Length: 189
Type: CDS
Position: Chr10:20765935..20766097 (+ strand)
Length: 163
Type: CDS
Position: Chr10:20766202..20766596 (+ strand)
Length: 395
Type: CDS
Position: Chr10:20766597..20767805 (+ strand)
Length: 1209
Type: three_prime_UTR


>Vigan.10G148700.01
ACAAATGCTA CCGGACTCTC TGGACTCAAA TTAGTACTGT TAATAATTAG ATTCCTCTGA ACTATGATTC ACATAAGCAG
GAAAGCTCCC ACAATAATAA TTGTAGTTTT GATAAGAGCT GGCTACCATT ATAACTAACA AAGACTTGCA ATGCAAGCTT
TGGCACAGAA AAAAAAACAA AAATTGCGAT GGCTCAACCT TAACTACCGC ATACATTCCT ATATCTGAGG CGCAGTTTCC
TTTGCTTATT ATTCCTGTGT CCTGCCATTT AAAGAAAAAC ATAGATTTAT TTTCAATTAA TTCTCTATAA AGAATTCAGA
TAAATAATTT CTAAAGAAAA AGTTAAAACC CAGAAGAAAG AAACATTAAG TGCTTTTCTC ACAAATTATG AATAATAGTT
TTAGATAATC ATAAATGGGT TTCACAAAAA AAAATGAAAA TAAACATTAC AGTGAAATAG AATAGCACAG GGACAATTGG
GGCATGTGGC TGTTGTCCTC AATTTCCGTT AAAAAGTCCG AACTTGAAAT CTCAAGTGCT CTATCACAAA AAGTTGCTGG
GGTAAAATCA AATAGTTCAC ATTCGACACT AGGGCAATAT GAGAAGACCA AGTGTAATTG TCATAATCGA TGAATCATAA
TGGTGTATTA TGGAGTAGGG GGTGAAATTG TGATCTTACC AACCGTACCC TTGATGAGAG GAGACCATGA AACTATAGCT
TAAGCCTGGA TTTAGCATGA ATATGTAATT ACAATATTCT GATTCAGAGT AACGTGAAAA AAGTAATAAA AGAGGACCAT
CACATATCAT ACGCCACAGA AAGCAACTAG AAAAGTTTAA TAACCTTCAT TTAGTCCACG GAGCATAAAG TGGATTGTCT
TTTTGTAACG AGAATGCTTC AACATTACTA CTCTTCATTG ACAGTACTTC TTAACGAATT GATTTCTTGG GCCACGATAT
CTTATACAAT GATTAACCTC TTGTTATCTC TATAAAAAAC CATTTCCCCC ATCGTTAATT TCCACAGCTA AAAGCTAAAA
ATCATCAAAG TACTCAAATT GGCATGGCTA CCATGGTTGC TTTCTTGAAC TTGGTCATCA TACTTTCAGT AGTCTCTACC
GGAAAGTCAC TGAGCTTAAA CTACTATGAA AATACATGCC CTAAAGTGGA GTGCATTGTT GCCAAGGCAG TGAAGGATGC
CACTGCTAAG GACAAAACTG TTCCAGCAGC ACTTCTTCGA ATGCACTTCC ATGATTGTTT CATTAGGGGG TGTGATGCCT
CCGTGCTGCT AAATTCAAAA GGAAACAGCA AAGCAGAAAA AGATGGGCCA CCAAACGTTT CTTTGCATGC ATTCTATGTC
ATTGATGCAG CAAAGAAAGC ATTAGAAGCT GCATGCCCTG GTGTCGTCTC TTGTGCTGAT ATCCTATCTC TAGCAGCAAG
GGACGCAGTT TTTCTGTCTG GAGGACCTAC ATGGGATGTT CCTAAAGGAA GAAAGGATGG AAGAACATCT AAGGCCAGTG
AAACCATACA GTTACCAGCT CCAACCTTCA ACTTATCACA ATTGCGGCAG AGCTTCTCTC AAAGAGGACT GTCTGGGGAA
GACTTGGTAG CTCTGTCAGG GGGGCATACT TTGGGTTTCT CTCATTGCTC ATCTTTCAAG AGCAGACTTC ACAGCTTTAA
TGCTACACAT GATGTTGATC CTTCATTAAA TCCGTCATTT GTAGCAAAAC TGAAATCAAT TTGTCCACTA AAAAATCAGG
CAAAAAATGC AGGCACCACT ATGGATCCTT CTTCAGTAAC TTTCGACAAT ACATATTACA GGTTGATCCT CCAACATAAA
GGCTTGTTTT CTTCTGATCA AGCTTTGCTC GATAACCCAG ATACCAAGAA TCTGGTTACG AAGTTTGCCA CCTCACAAAA
GGCATTTTAT CAGGCTTTCG CAAAGTCCAT GATCAAAATG AGTAACATCA ACGGGGGCCA AGAGGTTAGG AAGGACTGCA
GAGTGATCAA TTAAAAAATT AAATCAATTT GATAGTTGAT GTTCCATACA AGTTATTCAG TACGAAGTTG GTGGAAAAAA
AGTTCCCAGA AGGGCAAGAA TATTGCATCT TTTTCCTCCA CAAAAAAGAA ATTGGTATGT TTATCTCAAG TTAATAAAAT
ATTAAGCATG TCTTGGGAAA TTAATTTAGT AGTTATAAAT ATCAGTTTGG TAGTCTTGAG TAATGAGTCA AGCAAGGTTC
AGCTCGGACA AATGAAAGTA TCCCAGCTTA ATCAAAGGAT GAGAGTCAAG GTAACGATTA AGAACTCAAC TTTTGTGAGA
ATCGAGCCAA ACAAACTTAA CTCACAAACG ACTATGATTT GGAAATTGGC AGATATGATT TTCTTCTATA ATAATAATGC
TACGAAGTCT TATCATTAAT ATATCCAATG CAGCCTCAAA GAACATTATT GGCGCATATG GTAATTTTAG GCATAGTTCA
TGTCTGAGCG TTCACTTTCC CATTTTCCTC CCAAAACTGT TATCGGTTCG AAGATGTTGT TTCTGATGTA TAGGATGAAA
TGTTGCGAAG AATGTGACTA CCTTCATTGC AAAAGAAATT TTTCTTAAAT TATCAACTCA ACAATTATAT GTGGTTTTCA
GGCTCTAGCC ACTTAACAGC ACTGCAAATA CCAACCTGTA AACATCCTTT TACAAATGAG TAACAAAACA CCAAGTGATC
TTAGAGGAAA ATTAAACTAA ATATACCTCA AAAACATGCT GAACTAAATA ACACTAAAGT TTTCATCAAC AATTGCCATC
CCAGTTCCCC ATCCACAAAG ATTGTTGCCT TATACCATTT CTCAAGATTA AGGAACCACA AAATAAAAAG AAATAGTTTT
TTCTTCACCT AATGTATAGC AGAGAAGTAT GATATCCATT TTAGGAGGCA TTTCTGTAGC GTGATCATGT CCTAAACAGT
TTCTTGATCC TATAGATATG AGATGCAAGA AAGCAACAAG AATTTGTATA ACAACAGCCG CCCGACCAAA AAAACTGCTA
AATTTTTTCA CAGTTTTGAG CTACCTCAAG CATTATCTTT TGAGATAGGA GCTATCTCTG CCAATTGAAT GTTACCACTT
AGTAGTGATG CTTTATCAGA TGGAAGAAAG GAAAACCCGT CAAGAAGTTT CAAACACTTT AAGCCCCATT TTCCCATCAA
AAACTCAATA AGGTGATGCC CAC

>Vigan.10G148700.01
ATGGCTACCA TGGTTGCTTT CTTGAACTTG GTCATCATAC TTTCAGTAGT CTCTACCGGA AAGTCACTGA GCTTAAACTA
CTATGAAAAT ACATGCCCTA AAGTGGAGTG CATTGTTGCC AAGGCAGTGA AGGATGCCAC TGCTAAGGAC AAAACTGTTC
CAGCAGCACT TCTTCGAATG CACTTCCATG ATTGTTTCAT TAGGGGGTGT GATGCCTCCG TGCTGCTAAA TTCAAAAGGA
AACAGCAAAG CAGAAAAAGA TGGGCCACCA AACGTTTCTT TGCATGCATT CTATGTCATT GATGCAGCAA AGAAAGCATT
AGAAGCTGCA TGCCCTGGTG TCGTCTCTTG TGCTGATATC CTATCTCTAG CAGCAAGGGA CGCAGTTTTT CTGTCTGGAG
GACCTACATG GGATGTTCCT AAAGGAAGAA AGGATGGAAG AACATCTAAG GCCAGTGAAA CCATACAGTT ACCAGCTCCA
ACCTTCAACT TATCACAATT GCGGCAGAGC TTCTCTCAAA GAGGACTGTC TGGGGAAGAC TTGGTAGCTC TGTCAGGGGG
GCATACTTTG GGTTTCTCTC ATTGCTCATC TTTCAAGAGC AGACTTCACA GCTTTAATGC TACACATGAT GTTGATCCTT
CATTAAATCC GTCATTTGTA GCAAAACTGA AATCAATTTG TCCACTAAAA AATCAGGCAA AAAATGCAGG CACCACTATG
GATCCTTCTT CAGTAACTTT CGACAATACA TATTACAGGT TGATCCTCCA ACATAAAGGC TTGTTTTCTT CTGATCAAGC
TTTGCTCGAT AACCCAGATA CCAAGAATCT GGTTACGAAG TTTGCCACCT CACAAAAGGC ATTTTATCAG GCTTTCGCAA
AGTCCATGAT CAAAATGAGT AACATCAACG GGGGCCAAGA GGTTAGGAAG GACTGCAGAG TGATCAATTA A

>Vigan.10G148700.01
MATMVAFLNL VIILSVVSTG KSLSLNYYEN TCPKVECIVA KAVKDATAKD KTVPAALLRM HFHDCFIRGC DASVLLNSKG
NSKAEKDGPP NVSLHAFYVI DAAKKALEAA CPGVVSCADI LSLAARDAVF LSGGPTWDVP KGRKDGRTSK ASETIQLPAP
TFNLSQLRQS FSQRGLSGED LVALSGGHTL GFSHCSSFKS RLHSFNATHD VDPSLNPSFV AKLKSICPLK NQAKNAGTTM
DPSSVTFDNT YYRLILQHKG LFSSDQALLD NPDTKNLVTK FATSQKAFYQ AFAKSMIKMS NINGGQEVRK DCRVIN*