GBrowse Details

Vigan.10G155400.01

Basic Information:
Name: Vigan.10G155400.01
Multiple alignment
Variant Information
Position: Chr10:21396302..21398431 (+ strand)
Length: 2130
Functional Information:
Description: Similar to Lactoylglutathione lyase. [G7KGE7, Medicago truncatula]
InterPro: Glyoxalase-like domain (IPR025870)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.26,0.45,40.75,46.82,100.02,17.14,0.61,83.33
Automatic updates:
Name: NM_001250551 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max putative lactoylglutathione lyase 13 (GLYI-13), mRNA.
PubMed ID: 27083416 NCBI(pubmed)
Status: Known Variant
Name: NM_001251449 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max putative lactoylglutathione lyase (GLYI-2), mRNA.
PubMed ID: 27083416 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr10:21396302..21396639 (+ strand)
Length: 338
Type: five_prime_UTR
Position: Chr10:21396640..21396815 (+ strand)
Length: 176
Type: CDS
Position: Chr10:21396897..21397014 (+ strand)
Length: 118
Type: CDS
Position: Chr10:21397598..21397888 (+ strand)
Length: 291
Type: CDS
Position: Chr10:21397889..21398431 (+ strand)
Length: 543
Type: three_prime_UTR


>Vigan.10G155400.01
TATTGTCGTT AACTTCTCTT CCAATTCCGA GGGTAACTTG AAAAGCTAAT TCTAAACAAC AGAAACAAAC ACACAGCCAT
AGTACAGAAC GAAAAACTAG GTTTCAATGA CCATGAAGCA TTTAGCTGTG TTTTCTTTCA ATCAAAAGAA CCTTCGAGGA
AGGTTCCTAC TAGAAGTAAA ATGTTAGGAA GTTTCGTATA TAGTTGTTAC TCTACAAAAT TCATTGACGT TGTATATAAG
AGCATCTTAA CGTAGCCAAT GGCATGCAGT GCAAAGCTGA GACGTGAATT GGCAACAGAA AAAGGTGTTA AGGTGAGTGC
ATTGAGAGAG AAGAAGAGAT GAAGATGGAG ATTGAGGAAG TTGGGAACTG CGAAGCACAA CCACTTCCCC TGCTGTCACT
CAACCACGTG TCCCTCTTGT GCAGATCGGT GTGGGAGTCT ATGAGGTTTT ATGAGGATGT TTTGGGCTTT GTTCCCATCA
AACGCCCTTC TTCTTTCAAT TTCACTGGAG CCTGGTTTTA CAATTATGGT ATTGGAATAC ACTTGATTGA GAATCCTCAT
GTTGATGAAT TTGATGCCTG TGCCAATGAA TTTAGGCCCA TCAATCCCAA GGACAACCAT ATCTCATTCC AGTGTACTGA
TGTTGAACTT GTTAAGAAGA GGTTAGAAGA GAGGGGGATG AGGTATGTGA CAGCTGTGGT GGAGGAAGGA GGAGCCAAGG
TGGACCAAGT GTTCTTCCAT GACCCTGATG GCTACATGAT TGAGCTCTGC AACTGTCAGA ATATCCCAAT CATTCCTATT
TCTTCCTGCT CTCTCAAGCC TCGCGGCCAC AGCTTCAAGA AGACAGCTCC TTACAAGTGT GGATTCATGG AGAATGTCAT
GATGGAAAGC TTGAGCACCG ACATGATCAA TTTCTCCTTT TAAAACAAAT GAGTGAAGAA CCTTATCTTG TTTCTTTTTC
TTTGTAAGAT AAAAAAAAGG GTTTGCTGGC TTATAAAAAA CGATAGGTTG GGAGATATTA AGATAAGTCT GTCATTAATC
TATGCTAAAA CCTACACAAA CGTGGCCTAG AAGTCTTCAT TTGTAAGAGA ATATGGTGGA CCAAAGTAAA TCTGTACTGC
TATATTGTAT CATGTTTCTG TTTGAAATAA TAATAATAAT AATAAAAGGA AGAAATTGTG AGTTGATCGG TTGCACTGTT
CACCGGCGGA TTTGTCTTTA TCTTTTGATT CTTTTCCATA GGAGGCGTTG TGTGATGAAA TTTTCAGCCT ACCAAAATTG
TGCTGCCTCC ACAAAAGAGA ACAGAATAGA GCTGGCAATG GCCCGAGGTT ACCAAATGGA TGGTTCAAAT TCGATGCAAA
AAGTAGAAAG AGTTTATTCA TGAAATAACA GTTTTGTCCT AATAAATCCA ATGTATCATA AACAGAGTTG GTTGATGTGT
AGATTCATGA AAACAATTTT TTTTTT

>Vigan.10G155400.01
ATGAAGATGG AGATTGAGGA AGTTGGGAAC TGCGAAGCAC AACCACTTCC CCTGCTGTCA CTCAACCACG TGTCCCTCTT
GTGCAGATCG GTGTGGGAGT CTATGAGGTT TTATGAGGAT GTTTTGGGCT TTGTTCCCAT CAAACGCCCT TCTTCTTTCA
ATTTCACTGG AGCCTGGTTT TACAATTATG GTATTGGAAT ACACTTGATT GAGAATCCTC ATGTTGATGA ATTTGATGCC
TGTGCCAATG AATTTAGGCC CATCAATCCC AAGGACAACC ATATCTCATT CCAGTGTACT GATGTTGAAC TTGTTAAGAA
GAGGTTAGAA GAGAGGGGGA TGAGGTATGT GACAGCTGTG GTGGAGGAAG GAGGAGCCAA GGTGGACCAA GTGTTCTTCC
ATGACCCTGA TGGCTACATG ATTGAGCTCT GCAACTGTCA GAATATCCCA ATCATTCCTA TTTCTTCCTG CTCTCTCAAG
CCTCGCGGCC ACAGCTTCAA GAAGACAGCT CCTTACAAGT GTGGATTCAT GGAGAATGTC ATGATGGAAA GCTTGAGCAC
CGACATGATC AATTTCTCCT TTTAA

>Vigan.10G155400.01
MKMEIEEVGN CEAQPLPLLS LNHVSLLCRS VWESMRFYED VLGFVPIKRP SSFNFTGAWF YNYGIGIHLI ENPHVDEFDA
CANEFRPINP KDNHISFQCT DVELVKKRLE ERGMRYVTAV VEEGGAKVDQ VFFHDPDGYM IELCNCQNIP IIPISSCSLK
PRGHSFKKTA PYKCGFMENV MMESLSTDMI NFSF*