GBrowse Details

Vigan.10G158400.01

Basic Information:
Name: Vigan.10G158400.01
Multiple alignment
Variant Information
Position: Chr10:21701615..21703297 (- strand)
Length: 1683
Functional Information:
Description: Similar to glutaredoxin-C3-like. [XP_004512079.1, Cicer arietinum]
GO: Biological Process: cell redox homeostasis (GO:0045454)
Molecular Function: electron carrier activity (GO:0009055)
Molecular Function: protein disulfide oxidoreductase activity (GO:0015035)
InterPro: Glutaredoxin (IPR002109)
Glutaredoxin active site (IPR011767)
Glutaredoxin, eukaryotic/virial (IPR011899)
Thioredoxin-like fold (IPR012336)
Glutaredoxin subgroup (IPR014025)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:22.25,20.45,12.85,14.17,19.34,33.65,11.88,12.52
Arabidopsis thaliana homolog: AT1G77370.1
Automatic updates:
Name: NM_001248302 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527634 (LOC100527634), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001249752 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100500348 (LOC100500348), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:21701615..21702044 (- strand)
Length: 430
Type: three_prime_UTR
Position: Chr10:21702045..21702100 (- strand)
Length: 56
Type: CDS
Position: Chr10:21702593..21702691 (- strand)
Length: 99
Type: CDS
Position: Chr10:21702792..21702865 (- strand)
Length: 74
Type: CDS
Position: Chr10:21702987..21703150 (- strand)
Length: 164
Type: CDS
Position: Chr10:21703151..21703297 (- strand)
Length: 147
Type: five_prime_UTR


>Vigan.10G158400.01
AATTGAAGAA CTCCTATGTA TGTTAGAAAA AATAGATGCT TTCCTTGAGT TTCAGCGATT TTGCATTGCG TTTTGAGAAA
TTTGCTGTAC TGCGACCATC GAAGAACAGG AAGGAAAGGA ACAGTGTATT TGAGAAAGAG AAGGAAAATG ATGATGGGGT
TAAGGTGGAG TATGATTGTA AGGGTGACGT TGACTGTTTT TGTGTTGTGG TTTGGAACAC TGCACGTCCA AGCCTCTAAT
TCTGTTTCCG CCTTCGTTCA AAACGCCATC TACTCCAACA GAATCACCGT TTTCTCCAAA TCCTATTGCC CCTATTGCTT
GCGCGCCAAA CGCATACTTG CTGAACTAAA TGAGAAACCG TTTGTGGTGG AGCTCGATTT ACGAGATGAC GGGTATGAAA
TTCAGAGTGT TATTCTGGAT TTGATCGGTC GAAGGACAGT GCCACAAGTA TTTGTGAATG GCAAGCATAT TGGTGGATCA
GATGATCTCA GTGCTGCAGT CCAAAGTGGT GAGTTGCAGA AACTTCTCAG TGCAAGTTGA TGGTGTGCTA GAGATTTACG
AGCACTAGCA TAGTAGCATC TACTATTCGT TGGTATGTGG ACACTGACAT CTTTGATTGA TAATGAGGTT TTCAAGCTTA
TAGCAGCATA GTATATTTCA TTTTTATTTT TGGTTATATA GGCGACAGTG TGTATTCTTT AGTACAGGAA TAGCCTGTCG
TTTCTTCATT CTGCTTCGAA TCCGCATGAA TTTTTCGTAT AGATATGTAG TACTATTGAA AGGATGAGCT CTGAAACGTT
GAGTTTGAGC TCTAGTTGGT ATATTTTTCT CTGGGTTAAA CTGTTGGTTA CTTGTGAATA TTTCCCCTTC ATTGATGTTT
TGGTGAATCA ATCCCATATG ATGGCGTGGA GACATAAAAA TGTCTGAAAT ATGCGAGAAA ATTATGATCC TACGATACGA
ATCAACCAAG 

>Vigan.10G158400.01
ATGATGATGG GGTTAAGGTG GAGTATGATT GTAAGGGTGA CGTTGACTGT TTTTGTGTTG TGGTTTGGAA CACTGCACGT
CCAAGCCTCT AATTCTGTTT CCGCCTTCGT TCAAAACGCC ATCTACTCCA ACAGAATCAC CGTTTTCTCC AAATCCTATT
GCCCCTATTG CTTGCGCGCC AAACGCATAC TTGCTGAACT AAATGAGAAA CCGTTTGTGG TGGAGCTCGA TTTACGAGAT
GACGGGTATG AAATTCAGAG TGTTATTCTG GATTTGATCG GTCGAAGGAC AGTGCCACAA GTATTTGTGA ATGGCAAGCA
TATTGGTGGA TCAGATGATC TCAGTGCTGC AGTCCAAAGT GGTGAGTTGC AGAAACTTCT CAGTGCAAGT TGA

>Vigan.10G158400.01
MMMGLRWSMI VRVTLTVFVL WFGTLHVQAS NSVSAFVQNA IYSNRITVFS KSYCPYCLRA KRILAELNEK PFVVELDLRD
DGYEIQSVIL DLIGRRTVPQ VFVNGKHIGG SDDLSAAVQS GELQKLLSAS *