GBrowse Details

Vigan.10G180600.01

Basic Information:
Name: Vigan.10G180600.01
Multiple alignment
Variant Information
Position: Chr10:23564759..23569309 (+ strand)
Length: 4551
Functional Information:
Description: Similar to Uncharacterized protein. [I1J991, Glycine max]
GO: Molecular Function: adenyl nucleotide binding (GO:0030554)
InterPro: CBS domain (IPR000644)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:62.62,27.80,7.82,97.38,8.49,15.35,9.78,8.79
Arabidopsis thaliana homolog: AT4G36910.1
Automatic updates:
Name: BT092214 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-10I20 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:23564759..23565142 (+ strand)
Length: 384
Type: five_prime_UTR
Position: Chr10:23565143..23565319 (+ strand)
Length: 177
Type: CDS
Position: Chr10:23565880..23565967 (+ strand)
Length: 88
Type: CDS
Position: Chr10:23566091..23566155 (+ strand)
Length: 65
Type: CDS
Position: Chr10:23566970..23567018 (+ strand)
Length: 49
Type: CDS
Position: Chr10:23567204..23567256 (+ strand)
Length: 53
Type: CDS
Position: Chr10:23568425..23568540 (+ strand)
Length: 116
Type: CDS
Position: Chr10:23568634..23568691 (+ strand)
Length: 58
Type: CDS
Position: Chr10:23568773..23568847 (+ strand)
Length: 75
Type: CDS
Position: Chr10:23568848..23569309 (+ strand)
Length: 462
Type: three_prime_UTR


>Vigan.10G180600.01
TCACAATCTT AAGCAAGAAC CGTATGATAA AATTAAATGT TTGAATGAAA AATTTCGTAG AAAATATTGA GACAGAGTTG
ATCGAAGAAG AATGAAACAC GTGAAAATGG AAGAGTTTTA ATCTGGTGGT GGCGAACATC TTAAGGAAGA AGGAATTACG
AATAACTGAT ATTTTGACGA CAGCAGCAAA CCAGGCCAAA ATTTGTAGGG ATATTTAAAG ATATTTTTAG AATTATATTG
GTAGGCGATG GAGGGGAGAG AAAAGAAATT GACGGTGGAT TTTGTGTGTT TGATATCTGC GGATTAGAGT GAGAAGTCTG
AACCCCCAAA ACAAACAAAC AAAGCCTCTC AATTCCGAAT CGAGTCCAAG CAAACTCCCA ACAAATGGAC TCGCTTCTCT
TCCACTCCCA TCTCCATACT CTTCCTCCGC TTTCCTCCGC CGCTCACCGT CCTCTCTACC AGCCTCTCAC CGCCGCCGCT
TTCCCCCGCT CTTCCCCTCT CCGGAGCTTC CGTCCCCCGC CGCTTCTCGC CGCCAACACC CTCACCGCTA ATTCAGTCTC
GCCAAGAAGT GGACTGTACA CTGTTGGTGA CTTTATGACA AGGAAAGAGG ATTTACATGT GGTGAAACCC ACAACTTCTG
TCGACGAAGC TTTGGATATT CTTGTTGAGA AAAGGATAAC TGGTTTTCCT GTGATAGATG ATAACTGGAA ACTGGTTGGT
GTTGTTTCAG ATTATGACTT GTTAGCACTG GACTCTATAT CAGGTCACGG GCTAAAGGAT AACAGCATGT TTCCAGAAGT
TGATAGTTCT TGGAAAACTT TTAACGAGAT TCAAAAGCTG CTCAGTAAGA CCAACGGAAA ATTGATTGGT GAATTGATGA
CCACTGCCCC TATGGTCGTT CGTGAGACCA CGAATCTTGA GGATGCTGCG AGGTTGTTGC TAGAAACCAA ATTTCGACGC
CTTCCTGTTG TAGATGCTGA GGGTAGACTG GTCGGGATTA TCACGAGAGG AAATGTTGTA AGAGCCGCAC TGCTAGTGAA
ACGAGCAAAC CAGAATAAAG CATGATAGGA TTTAGATGGT CATTCCATAA TTTGTTGCTG GATTTCATGC AGTAGTTGGA
TTGAAGTGTA TACAGAAGCT TCGCTTAAAT TAAAATTAAA ATTAAAATTT TGGCTTAGGC ATGTATATGT TATTGTTTTG
CTATTTACAG AGATGTTTAT CATTGGCAAT ATTTCAAAAG GGCAATTATT ATTCTTAATG ATCTCATTGT AATTTATATT
GGCCGCCTTG GTGATAATGA TGTTGAAAAT GTTGTAAATT GGCATACGAT TTTCAACCGG CATTAATCTA CCGCCATACT
TACCACGTCT GTTAGTAGTT GAGCTGAAGC GATGACTGGT CTTGGTCCGT CACTGTAATA AAACTCATGA CTAGATGTTG
ATCAGAACAG TTGGCAATAA AAGGTCATGC TCATCAGAAT AGTTGACAAT AACAGCCTGG GACCTGTCTT CTGCTTCTCC
ATTTTAT

>Vigan.10G180600.01
ATGGACTCGC TTCTCTTCCA CTCCCATCTC CATACTCTTC CTCCGCTTTC CTCCGCCGCT CACCGTCCTC TCTACCAGCC
TCTCACCGCC GCCGCTTTCC CCCGCTCTTC CCCTCTCCGG AGCTTCCGTC CCCCGCCGCT TCTCGCCGCC AACACCCTCA
CCGCTAATTC AGTCTCGCCA AGAAGTGGAC TGTACACTGT TGGTGACTTT ATGACAAGGA AAGAGGATTT ACATGTGGTG
AAACCCACAA CTTCTGTCGA CGAAGCTTTG GATATTCTTG TTGAGAAAAG GATAACTGGT TTTCCTGTGA TAGATGATAA
CTGGAAACTG GTTGGTGTTG TTTCAGATTA TGACTTGTTA GCACTGGACT CTATATCAGG TCACGGGCTA AAGGATAACA
GCATGTTTCC AGAAGTTGAT AGTTCTTGGA AAACTTTTAA CGAGATTCAA AAGCTGCTCA GTAAGACCAA CGGAAAATTG
ATTGGTGAAT TGATGACCAC TGCCCCTATG GTCGTTCGTG AGACCACGAA TCTTGAGGAT GCTGCGAGGT TGTTGCTAGA
AACCAAATTT CGACGCCTTC CTGTTGTAGA TGCTGAGGGT AGACTGGTCG GGATTATCAC GAGAGGAAAT GTTGTAAGAG
CCGCACTGCT AGTGAAACGA GCAAACCAGA ATAAAGCATG A

>Vigan.10G180600.01
MDSLLFHSHL HTLPPLSSAA HRPLYQPLTA AAFPRSSPLR SFRPPPLLAA NTLTANSVSP RSGLYTVGDF MTRKEDLHVV
KPTTSVDEAL DILVEKRITG FPVIDDNWKL VGVVSDYDLL ALDSISGHGL KDNSMFPEVD SSWKTFNEIQ KLLSKTNGKL
IGELMTTAPM VVRETTNLED AARLLLETKF RRLPVVDAEG RLVGIITRGN VVRAALLVKR ANQNKA*