GBrowse Details

Vigan.10G181200.01

Basic Information:
Name: Vigan.10G181200.01
Multiple alignment
Variant Information
Position: Chr10:23634372..23636999 (- strand)
Length: 2628
Functional Information:
Description: Similar to WRKY transcription factor 15 isoform X1. [XP_003517316.1, Glycine max]
GO: Biological Process: regulation of transcription, DNA-dependent (GO:0006355)
Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700)
Molecular Function: sequence-specific DNA binding (GO:0043565)
InterPro: DNA-binding WRKY (IPR003657)
Zn-cluster domain (IPR018872)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.87,7.70,13.42,17.39,11.15,19.48,25.96,12.20
Arabidopsis thaliana homolog: AT2G23320.1
Automatic updates:
Name: EU019559 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max transcription factor (WRKY14) mRNA, partial cds.
PubMed ID: 18384508 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr10:23634372..23635359 (- strand)
Length: 988
Type: three_prime_UTR
Position: Chr10:23635360..23635522 (- strand)
Length: 163
Type: CDS
Position: Chr10:23635793..23635921 (- strand)
Length: 129
Type: CDS
Position: Chr10:23636036..23636706 (- strand)
Length: 671
Type: CDS
Position: Chr10:23636707..23636999 (- strand)
Length: 293
Type: five_prime_UTR


>Vigan.10G181200.01
TTTGGATCTT ACATACATGG ATACATATTT TAGTACATTA AACAGAGGCA AGTAAAGCAA AGCAATGTCA CCCAAATTTT
GACGGAAACA GGGACGAGAC GAGTAGGGTT AGCTAGCTAG CGTGACAGTA CAGTGACCTA GTGGACCAAA CAGGCCACTA
TCGTTTTTTC TTTTAATTTA TATTTTATAT TTAATATTTA AATTTTGTTT TGGCATGACT TGACCAGGGT ACCCTATGAG
CCTCTTTTAT TTTCTTTTGT CTTCCAAACC CTTTCTCTCT CTTTGATGCA ATTATGCCTG TGGAGCTCAT GATGGGTTAT
AGGAACGATG GTTTCGCCGA AGAGAATGCG GTTCGAGAAG CCGCGTCAGG GCTAGAGAGC GTGGAGAAGC TCATCAGGTT
GCTGTCACAC GCTCAGCTGC AACAACAACA CCAACAACTT CAACAACAAT CGCACGCGAC CAATTCAAAG TCTTCCATGG
AAATTGAATC CGATTACGGA GCTGTCGCTG ACGTGGCGGT TTCCAAGTTC AAGAAGGTCA TTTCGCTTCT GGGCCGAACC
AGAACCGGTC ACGCGCGTTT CAGAAGAGCC CCTGTGCCTC CTCCACCTCC TTCCGAACCC AGATTCTACC GCGCAACGCC
GCTGCAGCAG ATCCCGCCGC CCACCGAACA CCCTTTCATC CCAAAAAATG GTCCGATTGA GACAAAGGAC TCTTCCAAGA
CCATCAACTT CTCTTATTCT AATTCCTTCG TCTCCTCCCT CACCGGCGAC ACCGACACCA AACAGCCCTC TTCCTCGTCG
CCTGCGGCCG CAACGCCTTT TCAGATCACG AATCTCTCTC AGGTCTCCTC CGCCGGAAAG CCTCCTATTT CTTCGTCTTC
GTTGAAGAGG AAGTGCAGCT CTGATAATTT GGGTTCTGCC AAGTGTGGCA GTTCCTCCAG CCGATGCCAT TGCTCAAAGA
AGAGTAGAAA AATGAGGATG AAGAGGGTGG TGAGGGTACC CGCAATAAGT TTGAAGATGG CTGATATTCC ACCGGATGAT
TATTCTTGGA GGAAATACGG ACAGAAACCG ATTAAAGGAT CTCCTCATCC AAGGGGCTAT TACAAGTGCA GCAGTGTTAG
AGGGTGTCCA GCGCGCAAGC ATGTAGAGAG GGCTCTGGAT GACCCTTCTA TGTTGGTAGT AACCTACGAA GGTGAACACA
ATCACACACT CTCTGCAGTC GAAGCTACTA CTAATCTTAT CCTAGAATCT TCTTAGATGA TTAATTAATC ACCGATTTCC
CATCACAGAG CATATTCTGA TCATGCCATT CATGGCTTGT ACACTTGAAA ATTTTACTCT CGAAGGAGAT TAATTAATTG
ATGGGTGGGT GTTCCTTCCA TGTTCACATG TTCTGTATTT CTTTTCCTTT TCCTTTTCTG CTCTCTTCAA AACTTGGACC
GACCGACCGA CCGACCGACA CTGAATCCAT CCATTGCCAC TGTTTACATG TTTTTCTTTT AAAAAAGGGT GAAGATGGCG
TATTTGGTAA CGGGTTTAAT TTAATCTGAT TCAAATCTAA AGAGAAAAAA AAAGAAAGGA GGAAGTGGGG TTGGTATTGT
TCCTTTTCCT TTTCCTTTTC GTTTCTGGTT GATTGCTTTA CATGTGGTTA TGATCTTGGA TGCTGATGAT CTCTCTCAAC
ATTAATGGAT GAAAAAGACG GGGTCAAAGA AGGGATGGGA TGAGGAGGGA CATGTGGTGT TAATTGCTAA AGAAGGTTGA
CTAAAAGAAG AGAGTGGTTG GCACTTGGCA ATTGCCAGTT AGAACGGCAA ATTATAGTGA ATGGAACTGG GAAGGTGAGG
TGAAGAAAGA GAGTTTCAAT GCAATTTTTG TTTGAACCCT TTGGCTTCTA GCATAAAGTC TTGTTGCAAC GTTAGTAGTA
CATTCGTCTA ACGTCTTTAA TGTCTGTTTG GTTTAATGTT TAAAACATTA AATTCATGTT TCGCATTAAG AAATCAGAAG
ATACCTGTTC TGGCTTCTAC TTGGTAATGC ACCTGTTCTG TTTTGGGTCT CACCTTCTAA GCGAGTTTTA TAGAATTAAG
GTAGAATTAC TTGATATTCT GAATGGAAAA GCTACGCCAA AGTCAAAATG GGTGGGTGTG GAATTGATTC AGTTGATAAG
GGTCCTACCT TGTTTTAAAT TTGTGTAGTT GTTTGCTTTT CCATTCCCTT TGCCTTAACG TTTGCTCTTT CTTCAACGTA
CAAG

>Vigan.10G181200.01
ATGCCTGTGG AGCTCATGAT GGGTTATAGG AACGATGGTT TCGCCGAAGA GAATGCGGTT CGAGAAGCCG CGTCAGGGCT
AGAGAGCGTG GAGAAGCTCA TCAGGTTGCT GTCACACGCT CAGCTGCAAC AACAACACCA ACAACTTCAA CAACAATCGC
ACGCGACCAA TTCAAAGTCT TCCATGGAAA TTGAATCCGA TTACGGAGCT GTCGCTGACG TGGCGGTTTC CAAGTTCAAG
AAGGTCATTT CGCTTCTGGG CCGAACCAGA ACCGGTCACG CGCGTTTCAG AAGAGCCCCT GTGCCTCCTC CACCTCCTTC
CGAACCCAGA TTCTACCGCG CAACGCCGCT GCAGCAGATC CCGCCGCCCA CCGAACACCC TTTCATCCCA AAAAATGGTC
CGATTGAGAC AAAGGACTCT TCCAAGACCA TCAACTTCTC TTATTCTAAT TCCTTCGTCT CCTCCCTCAC CGGCGACACC
GACACCAAAC AGCCCTCTTC CTCGTCGCCT GCGGCCGCAA CGCCTTTTCA GATCACGAAT CTCTCTCAGG TCTCCTCCGC
CGGAAAGCCT CCTATTTCTT CGTCTTCGTT GAAGAGGAAG TGCAGCTCTG ATAATTTGGG TTCTGCCAAG TGTGGCAGTT
CCTCCAGCCG ATGCCATTGC TCAAAGAAGA GTAGAAAAAT GAGGATGAAG AGGGTGGTGA GGGTACCCGC AATAAGTTTG
AAGATGGCTG ATATTCCACC GGATGATTAT TCTTGGAGGA AATACGGACA GAAACCGATT AAAGGATCTC CTCATCCAAG
GGGCTATTAC AAGTGCAGCA GTGTTAGAGG GTGTCCAGCG CGCAAGCATG TAGAGAGGGC TCTGGATGAC CCTTCTATGT
TGGTAGTAAC CTACGAAGGT GAACACAATC ACACACTCTC TGCAGTCGAA GCTACTACTA ATCTTATCCT AGAATCTTCT
TAG

>Vigan.10G181200.01
MPVELMMGYR NDGFAEENAV REAASGLESV EKLIRLLSHA QLQQQHQQLQ QQSHATNSKS SMEIESDYGA VADVAVSKFK
KVISLLGRTR TGHARFRRAP VPPPPPSEPR FYRATPLQQI PPPTEHPFIP KNGPIETKDS SKTINFSYSN SFVSSLTGDT
DTKQPSSSSP AAATPFQITN LSQVSSAGKP PISSSSLKRK CSSDNLGSAK CGSSSSRCHC SKKSRKMRMK RVVRVPAISL
KMADIPPDDY SWRKYGQKPI KGSPHPRGYY KCSSVRGCPA RKHVERALDD PSMLVVTYEG EHNHTLSAVE ATTNLILESS
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