GBrowse Details

Vigan.10G181300.01

Basic Information:
Name: Vigan.10G181300.01
Multiple alignment
Variant Information
Position: Chr10:23648151..23651935 (+ strand)
Length: 3785
Functional Information:
Description: Similar to Glycosyltransferase. [Q4VZ79, Glycine max]
GO: Cellular Component: membrane (GO:0016020)
Molecular Function: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity (GO:0015018)
InterPro: Glycosyl transferase, family 43 (IPR005027)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:12.71,26.33,19.25,11.71,12.55,50.91,16.93,57.17
Arabidopsis thaliana homolog: AT4G36890.1, AT5G67230.1
Automatic updates:
Name: NM_001249894 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max glycosyltransferase (PGLCAT8), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:23648151..23648378 (+ strand)
Length: 228
Type: five_prime_UTR
Position: Chr10:23648379..23649079 (+ strand)
Length: 701
Type: CDS
Position: Chr10:23649242..23649784 (+ strand)
Length: 543
Type: CDS
Position: Chr10:23651288..23651519 (+ strand)
Length: 232
Type: CDS
Position: Chr10:23651520..23651935 (+ strand)
Length: 416
Type: three_prime_UTR


>Vigan.10G181300.01
GCGGTTTATC CTTAAACCCA AAGAAATGAT GAATGATTAA ATGACAGGGG CACCAACCTA AAGCCACCAG CAACCTAAAA
CCAACCACCA TCTCCAACCG ACAACCCTCT CTCTTATCTT TTCTGCTCCG AACTTCAATC TTAAAATTAA ATCCAAACAT
ATAATAGCGT AAGTGTGTTA CCACTTCAAC TCGCCAACAT TCTTTCTTTG ACTACGGACA GGGACAAAAT GAAGCTCTCG
GCGTTGCAGC AGAGTTACCT CACGCGCCGA GCCAACAGCT TCAGGGGATC CGCGCAGTTG GATTCGTCCG CCGACGGCGC
GGTGAAGTCG CCGGCGGCGA TTTTCTGGCT GGTAATCCAC GGTCTCTGCT GCCTCATCAG TCTCGTCCTT GGCTTCCGCT
TCTCCCGACT GGTGTTCTTC TTCCTGTTCT CTACCAGTCT CTACACCGCT CCGTTCCGCG GCGGAGCGGA TATCGCGGCG
CCGCTGAACG TCCCTCCGGC GGCGAACAGG ACGGCGGCGG TGAGCACTGC GAGTCGTGTG GTGGTCGGGC GGCACGGGAT
CCGAATCCGG CCGTGGCCGC ACCCGGATCC CGTGGAGGTG ATGAAAGCGC ACCGCATAAT CGAGAGAGTG CAGAGGGAGC
AGAGGTCGCT GTTCGGGGTG AAGAACCCTA GGACGGTGAT CGCTGTGACG CCAACGTATG TTCGGACGTT CCAGACGCTG
CACTTGACTG GTGTGATGCA CACGCTGATG CTGGTGCCGT ACGATCTGGT GTGGATCGTG GTGGAGGCCG GCGGAGTCAC
CAACGAAACC GCTTCGATTA TTGCCAAGTC CGGCCTCAGA ACAATCCACG TTGGCTTTTC TCCACGAATG CCGAATTCGT
GGGATGCTAG GCATAAACTC GAGTCTCGGA TGCGACTTCA TGCTTTGAGA GTTGTGAGAA AAGAGAAGCT GGACGGAGTT
GTGGTGTTTG CTGATGATAG TAATATGCAT AGTATGGAGT TGTTTGATGA AGCACAAAAT GTGAAATGGA TCGGAGCTGT
TTCGGTTGGA ATATTGCTTC ATTCGGATGA TTCTTCATCC ATGGTTCAAA CGGAGGAGGA AGGTGCGGTT ATGCCTGTGC
AGGGCCCTGC TTGTAATGCC ACGGATAAGT TGGTTGGGTG GCACACCTTC AATTCACTGC GTTATACAGG AAGGAGTGCG
GTTTATATTG ATGATAAGGC ACCTGTTCTG CCCACAAAGC TCGAGTGGTC TGGGTTTGTG TTAAATTCAA GGTTGGTTTG
GAAGGATGTT GATGATAAGC CAGAGTGGGT TAAAGATCTT GATGAATTAG ATGGGGCTGA TGAAGGAATA GAGAGTCCAC
TGTCCTTGCT CAAGAGCACG TCTGTGGTAG AGCCGCTTGG GAACTGTGGA CGTCAAGTTT TGCTTTGGTG GCTACGGGTT
GAAGCCCGCA CAGACAGCAA ATTTCCTTCT CAATGGATAA TTGACCCTCC TTTGGACATC ACTATTCCAT CAAAACGCAC
TCCATGGCCA GATACTCCTC CTGAGCTGCC ATCTAATGAG AAAGTGTTAA TTGGTAGCCA AGAGCAGACA AACAAGCCCT
CTACAAGGAC CAAAACGCCT AGATCCCGGC GTAGTAGAAG TAAGAGAAAG CATGACAGCA AAGTGATAGG AGTGCAAGTC
TCTACACATT CCGAGGAAAA CTAAACAGGG ATGTTAACCA TTGTATTGTA CATCAGAGGA ATTTACTGCC CAGTAACTGC
TACTGGCCTT CAGCAACAAG AATTTGGATT CATCAATGGA AAAAGCTGCT GCTGCATACG TTGGTGGCGT AACTTTTATG
GAGGCCCGAC CCGCATATGT GCATCCGAGT CTGATTTCAC CCATTTTTTA TATTCATTTT TATCTCTTTT TATTGGAGTT
CGTCGGAATG AAAGTTTGAA AGGTAATGTC GACTTGTTAT GCTGCCTTGC TGAAAGCCTG TATTCAATTG TAGGGTTGTA
TTGGATTGAA TATAAGGTGG TGCATTGAAT TAAGATTTTA AAAGATTATT CTGACAATAG TTTTCTTTTT TTTTTTTGGC
AAATTTTAAA ATACTCCTTA CAAATATTCG GAGTTATTAA 

>Vigan.10G181300.01
ATGAAGCTCT CGGCGTTGCA GCAGAGTTAC CTCACGCGCC GAGCCAACAG CTTCAGGGGA TCCGCGCAGT TGGATTCGTC
CGCCGACGGC GCGGTGAAGT CGCCGGCGGC GATTTTCTGG CTGGTAATCC ACGGTCTCTG CTGCCTCATC AGTCTCGTCC
TTGGCTTCCG CTTCTCCCGA CTGGTGTTCT TCTTCCTGTT CTCTACCAGT CTCTACACCG CTCCGTTCCG CGGCGGAGCG
GATATCGCGG CGCCGCTGAA CGTCCCTCCG GCGGCGAACA GGACGGCGGC GGTGAGCACT GCGAGTCGTG TGGTGGTCGG
GCGGCACGGG ATCCGAATCC GGCCGTGGCC GCACCCGGAT CCCGTGGAGG TGATGAAAGC GCACCGCATA ATCGAGAGAG
TGCAGAGGGA GCAGAGGTCG CTGTTCGGGG TGAAGAACCC TAGGACGGTG ATCGCTGTGA CGCCAACGTA TGTTCGGACG
TTCCAGACGC TGCACTTGAC TGGTGTGATG CACACGCTGA TGCTGGTGCC GTACGATCTG GTGTGGATCG TGGTGGAGGC
CGGCGGAGTC ACCAACGAAA CCGCTTCGAT TATTGCCAAG TCCGGCCTCA GAACAATCCA CGTTGGCTTT TCTCCACGAA
TGCCGAATTC GTGGGATGCT AGGCATAAAC TCGAGTCTCG GATGCGACTT CATGCTTTGA GAGTTGTGAG AAAAGAGAAG
CTGGACGGAG TTGTGGTGTT TGCTGATGAT AGTAATATGC ATAGTATGGA GTTGTTTGAT GAAGCACAAA ATGTGAAATG
GATCGGAGCT GTTTCGGTTG GAATATTGCT TCATTCGGAT GATTCTTCAT CCATGGTTCA AACGGAGGAG GAAGGTGCGG
TTATGCCTGT GCAGGGCCCT GCTTGTAATG CCACGGATAA GTTGGTTGGG TGGCACACCT TCAATTCACT GCGTTATACA
GGAAGGAGTG CGGTTTATAT TGATGATAAG GCACCTGTTC TGCCCACAAA GCTCGAGTGG TCTGGGTTTG TGTTAAATTC
AAGGTTGGTT TGGAAGGATG TTGATGATAA GCCAGAGTGG GTTAAAGATC TTGATGAATT AGATGGGGCT GATGAAGGAA
TAGAGAGTCC ACTGTCCTTG CTCAAGAGCA CGTCTGTGGT AGAGCCGCTT GGGAACTGTG GACGTCAAGT TTTGCTTTGG
TGGCTACGGG TTGAAGCCCG CACAGACAGC AAATTTCCTT CTCAATGGAT AATTGACCCT CCTTTGGACA TCACTATTCC
ATCAAAACGC ACTCCATGGC CAGATACTCC TCCTGAGCTG CCATCTAATG AGAAAGTGTT AATTGGTAGC CAAGAGCAGA
CAAACAAGCC CTCTACAAGG ACCAAAACGC CTAGATCCCG GCGTAGTAGA AGTAAGAGAA AGCATGACAG CAAAGTGATA
GGAGTGCAAG TCTCTACACA TTCCGAGGAA AACTAA

>Vigan.10G181300.01
MKLSALQQSY LTRRANSFRG SAQLDSSADG AVKSPAAIFW LVIHGLCCLI SLVLGFRFSR LVFFFLFSTS LYTAPFRGGA
DIAAPLNVPP AANRTAAVST ASRVVVGRHG IRIRPWPHPD PVEVMKAHRI IERVQREQRS LFGVKNPRTV IAVTPTYVRT
FQTLHLTGVM HTLMLVPYDL VWIVVEAGGV TNETASIIAK SGLRTIHVGF SPRMPNSWDA RHKLESRMRL HALRVVRKEK
LDGVVVFADD SNMHSMELFD EAQNVKWIGA VSVGILLHSD DSSSMVQTEE EGAVMPVQGP ACNATDKLVG WHTFNSLRYT
GRSAVYIDDK APVLPTKLEW SGFVLNSRLV WKDVDDKPEW VKDLDELDGA DEGIESPLSL LKSTSVVEPL GNCGRQVLLW
WLRVEARTDS KFPSQWIIDP PLDITIPSKR TPWPDTPPEL PSNEKVLIGS QEQTNKPSTR TKTPRSRRSR SKRKHDSKVI
GVQVSTHSEE N*