GBrowse Details

Vigan.10G220000.01

Basic Information:
Name: Vigan.10G220000.01
Multiple alignment
Variant Information
Position: Chr10:26749389..26751725 (- strand)
Length: 2337
Functional Information:
Description: Similar to Uncharacterized protein. [I1K6E6, Glycine max]
GO: Molecular Function: DNA binding (GO:0003677)
Molecular Function: chromatin binding (GO:0003682)
InterPro: SANT/Myb domain (IPR001005)
Homeodomain-like (IPR009057)
Myb domain (IPR017930)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.02,0.34,0.73,0.06,2.96,1.72,14.01
Arabidopsis thaliana homolog: AT1G63910.1
Automatic updates:
Name: NM_001415066 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max myb superfamily protein (LOC128125823), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001415092 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max myb superfamily protein (LOC128125825), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:26749389..26749771 (- strand)
Length: 383
Type: three_prime_UTR
Position: Chr10:26749772..26750483 (- strand)
Length: 712
Type: CDS
Position: Chr10:26751169..26751298 (- strand)
Length: 130
Type: CDS
Position: Chr10:26751461..26751593 (- strand)
Length: 133
Type: CDS
Position: Chr10:26751594..26751725 (- strand)
Length: 132
Type: five_prime_UTR


>Vigan.10G220000.01
AAGAGATTGC ATACAAATTA ATCCCCGCAT TTGATCGAGG CAATAAGAGG CCACTGAGGA AACATTTAAG ACTAAAAGAC
AGGAATAGAA GGAGACTACA TAGGTAGCTA CAAAAGAAGT TAAGAAATTA AGATGGGTCA CCATTCTTGC TGTAACCAAC
AGAAGGTTAA GAGAGGCCTT TGGTCTCCCG AGGAAGACGA GAAGCTCATC AGATACATTA CCACTCACGG CTATGGTTGC
TGGAGTGAAG TTCCAGAGAA AGCTGGGCTT CAAAGGTGTG GCAAGAGTTG TCGCCTGAGA TGGATTAATT ATTTGAGGCC
TGATATTAGA AGAGGAAGGT TTACACCTGA AGAGGAGAAG TTAATTATAA GTCTTCACGG GGTTGTTGGC AACAGATGGG
CGCACATTGC AAGCCACTTA CCAGGTAGAA CTGACAATGA AATAAAGAAC TATTGGAATT CTTGGATCAA AAAGAAAATT
AGAAAGCCTT CGGTGACTTC ATCAATCACC ACTACACAGA GTGTGGATCA CCACCCTCAG TTCAATTATA GTTCCAACCA
ACTAGATCAC TTTGGCAACC AAGACAACGT AACAACAAAA CCAGCGGTGC AAGAAACCAT ATTTTCCTCG ACGTGCCCTC
TATTTATGTT TGACACTAGT TCGTTAGACC ACGGGACAAC AACAGTAGAC ACCACCAATG TTCGAGCAGA ACTGTTCCAA
GATTCATTGG GTTTGAGCAG CGAAACGTGG AACTTGAGCC ACCACCAAGT CCATCATGCT CTTCCTCCTC AACCAGCACA
GGCAGCAGCA ACTTTTACAG CAGCTACAGT GATGGATAGT ACGAATTATC TGCCACCATT GATAGAGAAT GTGGAAAACA
TGGTGCCAAA CATGGAAGTG CAGGGTTGTA GTATAGACGA GGAAGGAGAA ATGGCACTGG AGTGTTTGCG GAGACAAGAG
TTGAATGAGT GGGTGGAGAA TCAACAACAC TGTCCCAGTT TTCTTTTCTG GGACAGCGTT GAAGGACAAC TTGGGGGGGA
AGAACTAGCA CCAAACACGT CAAATATTGG AACCAATACA CTTTCACCTT TTCCTTCATC TTTATGACTG AGATCGAGGA
CTGTCCCCAC TGCTCTTTTT CTCATGCCCC TTCTAACCAG GAAGAGCTTT CAGAAATGGT CCAGGCCAGC CTGAAACTTA
TGCAGAGATT GCTTTTCTTC TTTTCATTTT TTTTTCCAAC CTCGCTTTCG ATTGTTGATT GGAAAAAGAT TGCGAAAAAA
CGAGTGAAGA TAATATTATT CTATATATAT AAATATAGCA AAGAGTGTTT ATTGAGTGTT TGACATGGAA GAGGATACTA
ATAAAGGCGA TTGGCAGCAG CAGGAAAGTT TGATTTTGAA GATATGGAAA AATATTGAAT TTGTTATTAA TTTGACTGTA
CATTTGGTGT TTTTTGAATG AGAATATACA ATAATGGATT TGCCTTTTAA 

>Vigan.10G220000.01
ATGGGTCACC ATTCTTGCTG TAACCAACAG AAGGTTAAGA GAGGCCTTTG GTCTCCCGAG GAAGACGAGA AGCTCATCAG
ATACATTACC ACTCACGGCT ATGGTTGCTG GAGTGAAGTT CCAGAGAAAG CTGGGCTTCA AAGGTGTGGC AAGAGTTGTC
GCCTGAGATG GATTAATTAT TTGAGGCCTG ATATTAGAAG AGGAAGGTTT ACACCTGAAG AGGAGAAGTT AATTATAAGT
CTTCACGGGG TTGTTGGCAA CAGATGGGCG CACATTGCAA GCCACTTACC AGGTAGAACT GACAATGAAA TAAAGAACTA
TTGGAATTCT TGGATCAAAA AGAAAATTAG AAAGCCTTCG GTGACTTCAT CAATCACCAC TACACAGAGT GTGGATCACC
ACCCTCAGTT CAATTATAGT TCCAACCAAC TAGATCACTT TGGCAACCAA GACAACGTAA CAACAAAACC AGCGGTGCAA
GAAACCATAT TTTCCTCGAC GTGCCCTCTA TTTATGTTTG ACACTAGTTC GTTAGACCAC GGGACAACAA CAGTAGACAC
CACCAATGTT CGAGCAGAAC TGTTCCAAGA TTCATTGGGT TTGAGCAGCG AAACGTGGAA CTTGAGCCAC CACCAAGTCC
ATCATGCTCT TCCTCCTCAA CCAGCACAGG CAGCAGCAAC TTTTACAGCA GCTACAGTGA TGGATAGTAC GAATTATCTG
CCACCATTGA TAGAGAATGT GGAAAACATG GTGCCAAACA TGGAAGTGCA GGGTTGTAGT ATAGACGAGG AAGGAGAAAT
GGCACTGGAG TGTTTGCGGA GACAAGAGTT GAATGAGTGG GTGGAGAATC AACAACACTG TCCCAGTTTT CTTTTCTGGG
ACAGCGTTGA AGGACAACTT GGGGGGGAAG AACTAGCACC AAACACGTCA AATATTGGAA CCAATACACT TTCACCTTTT
CCTTCATCTT TATGA

>Vigan.10G220000.01
MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY LRPDIRRGRF TPEEEKLIIS
LHGVVGNRWA HIASHLPGRT DNEIKNYWNS WIKKKIRKPS VTSSITTTQS VDHHPQFNYS SNQLDHFGNQ DNVTTKPAVQ
ETIFSSTCPL FMFDTSSLDH GTTTVDTTNV RAELFQDSLG LSSETWNLSH HQVHHALPPQ PAQAAATFTA ATVMDSTNYL
PPLIENVENM VPNMEVQGCS IDEEGEMALE CLRRQELNEW VENQQHCPSF LFWDSVEGQL GGEELAPNTS NIGTNTLSPF
PSSL*