GBrowse Details

Vigan.10G243500.01

Basic Information:
Name: Vigan.10G243500.01
Multiple alignment
Variant Information
Position: Chr10:28406732..28408672 (- strand)
Length: 1941
Functional Information:
Description: Similar to uncharacterized GPI-anchored protein At3g06035-like. [XP_004511342.1, Cicer arietinum]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,19.47,1.80,7.27,22.30,18.15,15.90
Arabidopsis thaliana homolog: AT3G06035.1
Automatic updates:
Name: NM_001251787 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306685 (LOC100306685), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001254680 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100814074 (LOC100814074), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:28406732..28407104 (- strand)
Length: 373
Type: three_prime_UTR
Position: Chr10:28407105..28407613 (- strand)
Length: 509
Type: CDS
Position: Chr10:28408487..28408571 (- strand)
Length: 85
Type: CDS
Position: Chr10:28408572..28408672 (- strand)
Length: 101
Type: five_prime_UTR


>Vigan.10G243500.01
CTTTTACTTA ACAAGGAAAC AGAAGAGATT CTTCACCATT TCAACTCTCT CTCTCTCTCT CTCTCTTTCT CTCTCTCTCC
GTGCTTTTCA AATTACAAAC AATGGCGTTA GTTCGCTTCC CTCTGATTTT CACACTCATC CTTTCTTCCA TTCTCTTGTC
GAATCACTCA GTAAAATGCG ACCACGGTGA GGAGGATGAT CTTTATCAGG AAATCAACAA CTATAGGAAA ACTTTAAACT
TGACATCTCT GACAAAGAAT GAAAATGCAA ATTGCTTTGC TGATGAAATG GCTGACCAGT TCAAGAATCA ACCTTGTACA
AATACCACAG GTGCTAACAC AGTCCCAGGT ACAGAGCCTC GGTTCTCCAA CTACCCAGAC CTTTTAAACA AATGTCACTT
GAATATTTCT AACACAAGGG ATGGAGCTGT AATGCCTGTT TGTGTTCCTG GCCTGGTTTC AAGCGTTGTC CTTACAAATT
TCACACAATC TCTCTACTCT GGTAATCTCA ACGACTCCAA GTTTACAGGA ATTGGTATTG GTTCAGAAGA TAACTGGATT
GTAGTCGTAC TGACCACAAA CACTCCCGAA GGAAGCTTTG TTCCTGATAC TTCTAATGGT GCTAATTTGA TTTCTAAATT
TGGTTTGATT TACTGCTCAA TTTTCCTATT AGTCGGTAAC TTTTTCCTGT TGTAAACAAG AGGATGCCAC TGTTCCCGTT
TTTTTCAGTA TTGTCAATTT GGAGGCATTG TACTAATCTG TGTCTGGAGA AACTGAAAAT AATGTAGAAA GGTGCTTTTC
TAGTGAAACA GACAGCGGTT CAGGTTAAGT GTTGTATGAA TACTGCAAAT GTCTGTAGGA TGCTAGCGAA GAGGAATAGG
GGGAACAGCA TTTTTAGACC AGGGTTGTTG TATTACTCTT ACCATAATCA ACATATTGTT TTTCTTTCCT TTCGTTCTGT
TTTTGAATGC TTTACATTTG CCAAATCCGA ATAGGAGGCA ATAAACTGTA GCATTGATGA GCACACCAGT GCTTTGGTTT
CGAAATGGAA ATTCTGTTGC TTATTTGA

>Vigan.10G243500.01
ATGGCGTTAG TTCGCTTCCC TCTGATTTTC ACACTCATCC TTTCTTCCAT TCTCTTGTCG AATCACTCAG TAAAATGCGA
CCACGGTGAG GAGGATGATC TTTATCAGGA AATCAACAAC TATAGGAAAA CTTTAAACTT GACATCTCTG ACAAAGAATG
AAAATGCAAA TTGCTTTGCT GATGAAATGG CTGACCAGTT CAAGAATCAA CCTTGTACAA ATACCACAGG TGCTAACACA
GTCCCAGGTA CAGAGCCTCG GTTCTCCAAC TACCCAGACC TTTTAAACAA ATGTCACTTG AATATTTCTA ACACAAGGGA
TGGAGCTGTA ATGCCTGTTT GTGTTCCTGG CCTGGTTTCA AGCGTTGTCC TTACAAATTT CACACAATCT CTCTACTCTG
GTAATCTCAA CGACTCCAAG TTTACAGGAA TTGGTATTGG TTCAGAAGAT AACTGGATTG TAGTCGTACT GACCACAAAC
ACTCCCGAAG GAAGCTTTGT TCCTGATACT TCTAATGGTG CTAATTTGAT TTCTAAATTT GGTTTGATTT ACTGCTCAAT
TTTCCTATTA GTCGGTAACT TTTTCCTGTT GTAA

>Vigan.10G243500.01
MALVRFPLIF TLILSSILLS NHSVKCDHGE EDDLYQEINN YRKTLNLTSL TKNENANCFA DEMADQFKNQ PCTNTTGANT
VPGTEPRFSN YPDLLNKCHL NISNTRDGAV MPVCVPGLVS SVVLTNFTQS LYSGNLNDSK FTGIGIGSED NWIVVVLTTN
TPEGSFVPDT SNGANLISKF GLIYCSIFLL VGNFFLL*