GBrowse Details

Vigan.11G015100.01

Basic Information:
Name: Vigan.11G015100.01
Multiple alignment
Variant Information
Position: Chr11:1535050..1543521 (+ strand)
Length: 8472
Functional Information:
Description: Similar to Uncharacterized protein. [I1K1G8, Glycine max]
GO: Biological Process: cation transport (GO:0006812)
Biological Process: phospholipid transport (GO:0015914)
Cellular Component: integral to membrane (GO:0016021)
Molecular Function: nucleotide binding (GO:0000166)
Molecular Function: magnesium ion binding (GO:0000287)
Molecular Function: phospholipid-translocating ATPase activity (GO:0004012)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: cation-transporting ATPase activity (GO:0019829)
Molecular Function: metal ion binding (GO:0046872)
InterPro: Cation-transporting P-type ATPase (IPR001757)
Cation-transporting P-type ATPase, subfamily IV (IPR006539)
P-type ATPase, A domain (IPR008250)
P-type ATPase, phosphorylation site (IPR018303)
HAD-like domain (IPR023214)
P-type ATPase, cytoplasmic domain N (IPR023299)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:2.52,6.53,5.98,5.11,3.50,2.18,2.75,7.30
Arabidopsis thaliana homolog: AT1G13210.1, AT1G17500.1, AT1G26130.2, AT1G54280.1, AT1G59820.1, AT1G68710.1, AT1G72700.1, AT3G13900.1, AT3G25610.1, AT3G27870.1, AT5G04930.1
Automatic updates:
Name: PV092040 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max isolate GmALA22 phospholipid-translocating ATPase (ALAs) mRNA, partial cds.
PubMed ID: -
Status: Known Variant
Name: PV092058 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max isolate GmALA26 phospholipid-translocating ATPase (ALAs) mRNA, partial cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr11:1535050..1535798 (+ strand)
Length: 749
Type: five_prime_UTR
Position: Chr11:1535799..1536194 (+ strand)
Length: 396
Type: CDS
Position: Chr11:1536786..1538146 (+ strand)
Length: 1361
Type: CDS
Position: Chr11:1539084..1539194 (+ strand)
Length: 111
Type: CDS
Position: Chr11:1539292..1539568 (+ strand)
Length: 277
Type: CDS
Position: Chr11:1539926..1540014 (+ strand)
Length: 89
Type: CDS
Position: Chr11:1540100..1540208 (+ strand)
Length: 109
Type: CDS
Position: Chr11:1540283..1540513 (+ strand)
Length: 231
Type: CDS
Position: Chr11:1540640..1540765 (+ strand)
Length: 126
Type: CDS
Position: Chr11:1541598..1541696 (+ strand)
Length: 99
Type: CDS
Position: Chr11:1542152..1542343 (+ strand)
Length: 192
Type: CDS
Position: Chr11:1542643..1543239 (+ strand)
Length: 597
Type: CDS
Position: Chr11:1543240..1543521 (+ strand)
Length: 282
Type: three_prime_UTR


>Vigan.11G015100.01
CCTCTTTCAT ACTGTTTTTT GGTCTATTTT TTATTTTGAT TTTTGTTTTG TTTTCTTTGG TGAAGAAGTG AAGCAAGACA
GTAATTTTAG CAGAGTACTA AACTAATAGT AATGACCAGC TCGGTAGTCG GTTCTATCAA TGTTTCTCTG TCTCTCTCAT
TTGTTTGCTT TTAGAAGCGG CAAAGTTAAC TGCTACTCAT ACCAAGCTCT TACTTTTTGA TCCTTTCTCT CTCTCTCTCT
CTCTCTGTTT CTCTCTCCAC AAACAGTTTG GTTGGACTTG CAAGGAAGAG ACATCTGCAG CTTCCATTCA GGGGAAGGAA
TTCCCAAAGC TTTATCTTAA GGGGTTTTCA AATTTCAGAG CACACTTTTT CTAGCTCATT TTGGCTGTGA TTGTGGTGTA
GTTGAGGTTT TGTGTTCTTG TTTGAAGGGA TCAAAGCTTG TTTGGTTTTT TCTCTGTTTT CGTTTTCTTA TCTTTGACTT
GCCATGTTGG GTAGTTCTTT TCATATTAAT TGAGTGTAGC CATTTTTAGG TGAAGGGGTT GGCCTAATTT TCATTATTAT
TATTATTTTT TTTAAATATC TGGCCCTGCA CTTTGGTGCT TTCATTCTGC TTATAGAAGG TGAGGATCAA AATCTGTGCT
TGAGGGAGGG GGTTATGAAT GATGGGTGCT TCTTTGATCC CATGGAGAAG TAGAGGAATA ACTGGGTTTT TTGTGTGAAG
AGAAGACATT TAGACACCCC ATTTGGAAAA TGCCTGGAGG GAGCAGCAAA AGAAGGATAC ATTTTAGCAA ACTGTACAGT
TTTTCTTGTT TGAAATCTCC TTTCAGAGAT GGTCATTCCC AAATTGGGCA GAAGGGGTAC TCCAGGGTTG TGTACTGCAA
TGATCCAGAT AACCCTGAAG CAGTTCAGTT GAGTTATGGA GGCAATTATG TTTCAACAAC CAAGTATACA GCTTTTAATT
TTATCCCCAA GTCTTTGTTT GAGCAGTTCA GGAGGGTTGC AAATATCTAC TTTCTCATTG TTGCGTGTCT TTCATTTAGT
CCATTGGCAC CTTTTACTGC TCTGAGTATT GTTGCTCCGT TGCTGGTTGT GATTGGAGCT ACTATGGCCA AGGAAGCTGT
GGAAGATTGG AGGAGGAGAA AACAGGATGT AGAGGCAAAC AACAGAAAGG TTCAGGTATA TGGTAGAAAT TATACGTTTA
CGGAGACTAG ATGGAAGAAA CTCCGTGTTG GGGATATCAT TAAAGTGTAC AAGGATGAAT ACTTTCCTGC TGATCTTCTT
TTGCTTTCAT CAAGCTATGG TGACGGGGTT TGTTATGTGG AGACTATGAA TCTTGACGGA GAAACTAATC TAAAATTAAA
GCATGCTTTG GAGGTGACAG TTCATCTTCA TGATGAAAAA TCTCTACAAA AGTTTAGGGC TATGGTTAAA TGTGAGGATC
CTAATGAAAA TCTGTACTCA TTTATTGGAA CTTTACAACA TGATGGTAAA GAATATCCTC TTTCCTTGCA GCAGATCCTG
TTAAGAGATT CTAAGTTGAA AAACACTGAT TTTATCTATG GCATTGTTAT CTTTACTGGC CATGATACGA AAGTTATGCA
GAATTCCACT GATCCTCCGT CCAAGAGAAG CAAAATTGAG AGGAAAATGG ATAAGATAAT CTACATCCTC TTCAGTACCT
TGGTTTTGAT ATCCTTTATT GGTTCAGTCT TTTTTGGTAT TGAGACCAAA AAGGATATTA GTGGTGGAAG GTATAGAAGA
TGGTATCTTC GTCCAGACAA TGCAACAGTG TTCTATGATC CCAGAAGGGC AACACTTGCT GCTGTTCTTC ATTTTTTGAC
TGCCATTATG TTGTATGGAT ATCTAATTCC GATATCACTT TACGTGTCCA TAGAAATTGT GAAAGTTCTA CAGAGCATTT
TCATCAACCA AGACCAAGAA ATGTATCATG AAGAATCAGA TAGGCCTGCT CATGCACGCA CATCAAATTT GAATGAAGAA
CTTGGCCAGG TTGACACAAT ATTGAGTGAC AAAACTGGTA CTTTGACATG TAACTCAATG GAGTTTGTCA AATGTTCAAT
AGGGGGCATT GCATATGGTC GTGGTATGAC AGAAGTAGAG AAGGCACTTG CTAGGAGAGG AAAAGGTGGA GAATCTGATG
ATGATAGTGG ATCATCTGAT TTCTTGGGCC AGAATAATGA GTCAGTTGAT TCTCTGCATC CGGTTAAGGG CTTTAATTTT
AGCGATGAGC GCCTAGTGAA TGGGCAATGG GTTAATGAAC CATATCCAGA CTTCATACAA AAATTCTTCC GAGTTTTAGC
TATTTGTCAC ACAGCTATTC CTGACGAAGA TAAAGAATCC GGAGAAATTT CCTATGAAGC CGAGTCACCA GATGAAGCAG
CTTTTGTCAT AGCAGCAAGG GAGCTCGGTT TTGAGTTTTT TGCAAGGACA CAAACAAGCA TATCATTGCA CGAATTGAAC
TATGAAAGTG GAAAAAAGGT TGACAGAGTG TACCAGCTTC TGCATGTCTT GGAGTTCAGC AGTTCCCGCA AAAGAATGTC
AGTGATAGTG AGGAATGAGG AAAATCAATT ATTGCTTCTA TGCAAGGGTG CAGACAGTGT AATGTTTGAA AGGCTCTCAC
AACATGGAAG ACAATTTGAG GTTGAAACGA GGGATCATAT CAAAAGGTAT GCCGAGGCTG GTTTAAGAAC CCTTGTAGTC
ACATACCGTG AACTTGATGA AGAAGAATAT AAGTTATGGG ATAAGGAGTT TTCAAAGGTC AAAACTTCTG TAACAGAAGA
CCGAGATGCA CTTGTGGATG CAGCTGCTGA TAGGATGGAA AGAGATTTGA TACTTCTTGG TGCTACTGCA GTTGAGGATA
GACTGCAAAA GGGGGTTCCC GAGTGTATTG AAAAGCTTGC ACGCGCAAAA ATCAAGTTAT GGGTATTGAC AGGAGACAAG
ATGGAAACTG CTGTCAACAT AGGGTATGCT TGCAGTTTAC TTAGAAAAGA CATGAAACAG ATAGTGATCA CTCTTGATTC
CTCAGATATC CTATACTTGG AAAAACAAGG GGACAAGCAG GCTCTAGCTA AGGCTTCTCT TGAAAGCATT AAGAAGCAAA
TTGGAGAAGG AATCTCACAA ATTAACTCTG CAAAAGAGAG TTCTAATGCA AATAATGGAA GTTCTTCTGG GTTTGGCTTG
ATAATTGATG GGAAGTCCTT GGATTATTCT CTTAATAAGA ATTTGGAAAG GTCCTTCTTT GAGCTTGCCA TTAATTGTGC
TTCTGTCATA TGTTGCCGAT CTTCACCCAA ACAAAAAGCT CGTGTTACAA AGTTGGTAAA ATTGGGAACA GGGAAGACAA
CATTATCTAT CGGTGACGGG GCAAATGATG TTGGCATGCT TCAGGAGGCT GATATTGGAG TTGGTATCAG TGGTGCTGAA
GGGATGCAGG CTGTAATGGC AAGTGATTTT GCAATAGCTC AATTCCGGTT TCTAGAGCGT CTTTTGTTGG TACATGGTCA
TTGGTGTTAT CGGCGTATAT CAATGATGAT ATGCTATTTT TTCTATAAAA ACATTGCATT TGGATTTACC CTTTTTTGGT
TTGAGGCGTA TGCTTCTTTC TCTGGTCAAG CTGCTTACAA TGATTGGTAC ATGTCATTTT ACAATGTCTT CTTCACTTCA
CTTCCAGTGA TCGCTCTAGG TGTTTTTGAT CAGGATGTTT CTGCCAAACT TTGCCTAAAG TATCCCTTTC TATATCTAGA
GGGAGTAGAA GACACCCTGT TCAGCTGGCC CCGAATTCTT GGGTGGATGT TGAATGGAGT CCTTAGTTCT TTAGTGATAT
TCTTCTTAAC CACTAATTCT GTGTTGAATC AAGCCTTCAG AAGAGATGGT AAGGTGGTTG ATTTTGAAAT ACTTGGGGTG
ACAATGTATA CATGTGTGGT GTGGACTGTG AATTGCCAAA TGGCACTATC CATAAATTAC TTTACTTGGA TACAACATTT
TTTTATATGG GGCAGCATCG CTTTCTGGTA TGTATTTGTG TTGGTCTATG GTTACTTATC TCCAGCAATA TCCACAACAT
CTTACAAGGT TTTTGTGGAA GCATGTGCTC CCAGTGGTCT CTATTGGCTA GTAACCCTTT TGGTTGTTGT GTGTGTGCTG
CTACCGTATT TCTCCTATAG GTCTTTCCAA AGTCGGTTTC TTCCAATGTA CCATGATATT ATACAGAGAA AACAAGTAGA
AGGGATTGAA ATTGGCTTAT CTGATGATGA TTTACCTAAA CAGGTCCAAG GAAAACTAAT ACATCTCAGA GAGAGATTGA
AGCAAAGGGA GTTGTGAAAT GTAAATGCTT CTAAACATAT TTTCTTTGAC CCTTGAAATT GTATTTGATT TCTTGCTGAG
CTGGGACGGG CATTGAAGTA GTGAGAATTG AATATAGCTT TTAAATTTTT TTTTTCTTTT CTTCCTTGGT TTTTATTTGT
TTATAAAATT AGGAGAGGAG AATTTGTGCA GCAGTCACCT GATGTAGATT AGCTATGTAA AGCTTGAGTA TTTGTTGTAC
CGAAAACGGT CATTGTATTT GTTAATGGAA GAAGCAATAG ATCTTTTACA ATATATTTT

>Vigan.11G015100.01
ATGCCTGGAG GGAGCAGCAA AAGAAGGATA CATTTTAGCA AACTGTACAG TTTTTCTTGT TTGAAATCTC CTTTCAGAGA
TGGTCATTCC CAAATTGGGC AGAAGGGGTA CTCCAGGGTT GTGTACTGCA ATGATCCAGA TAACCCTGAA GCAGTTCAGT
TGAGTTATGG AGGCAATTAT GTTTCAACAA CCAAGTATAC AGCTTTTAAT TTTATCCCCA AGTCTTTGTT TGAGCAGTTC
AGGAGGGTTG CAAATATCTA CTTTCTCATT GTTGCGTGTC TTTCATTTAG TCCATTGGCA CCTTTTACTG CTCTGAGTAT
TGTTGCTCCG TTGCTGGTTG TGATTGGAGC TACTATGGCC AAGGAAGCTG TGGAAGATTG GAGGAGGAGA AAACAGGATG
TAGAGGCAAA CAACAGAAAG GTTCAGGTAT ATGGTAGAAA TTATACGTTT ACGGAGACTA GATGGAAGAA ACTCCGTGTT
GGGGATATCA TTAAAGTGTA CAAGGATGAA TACTTTCCTG CTGATCTTCT TTTGCTTTCA TCAAGCTATG GTGACGGGGT
TTGTTATGTG GAGACTATGA ATCTTGACGG AGAAACTAAT CTAAAATTAA AGCATGCTTT GGAGGTGACA GTTCATCTTC
ATGATGAAAA ATCTCTACAA AAGTTTAGGG CTATGGTTAA ATGTGAGGAT CCTAATGAAA ATCTGTACTC ATTTATTGGA
ACTTTACAAC ATGATGGTAA AGAATATCCT CTTTCCTTGC AGCAGATCCT GTTAAGAGAT TCTAAGTTGA AAAACACTGA
TTTTATCTAT GGCATTGTTA TCTTTACTGG CCATGATACG AAAGTTATGC AGAATTCCAC TGATCCTCCG TCCAAGAGAA
GCAAAATTGA GAGGAAAATG GATAAGATAA TCTACATCCT CTTCAGTACC TTGGTTTTGA TATCCTTTAT TGGTTCAGTC
TTTTTTGGTA TTGAGACCAA AAAGGATATT AGTGGTGGAA GGTATAGAAG ATGGTATCTT CGTCCAGACA ATGCAACAGT
GTTCTATGAT CCCAGAAGGG CAACACTTGC TGCTGTTCTT CATTTTTTGA CTGCCATTAT GTTGTATGGA TATCTAATTC
CGATATCACT TTACGTGTCC ATAGAAATTG TGAAAGTTCT ACAGAGCATT TTCATCAACC AAGACCAAGA AATGTATCAT
GAAGAATCAG ATAGGCCTGC TCATGCACGC ACATCAAATT TGAATGAAGA ACTTGGCCAG GTTGACACAA TATTGAGTGA
CAAAACTGGT ACTTTGACAT GTAACTCAAT GGAGTTTGTC AAATGTTCAA TAGGGGGCAT TGCATATGGT CGTGGTATGA
CAGAAGTAGA GAAGGCACTT GCTAGGAGAG GAAAAGGTGG AGAATCTGAT GATGATAGTG GATCATCTGA TTTCTTGGGC
CAGAATAATG AGTCAGTTGA TTCTCTGCAT CCGGTTAAGG GCTTTAATTT TAGCGATGAG CGCCTAGTGA ATGGGCAATG
GGTTAATGAA CCATATCCAG ACTTCATACA AAAATTCTTC CGAGTTTTAG CTATTTGTCA CACAGCTATT CCTGACGAAG
ATAAAGAATC CGGAGAAATT TCCTATGAAG CCGAGTCACC AGATGAAGCA GCTTTTGTCA TAGCAGCAAG GGAGCTCGGT
TTTGAGTTTT TTGCAAGGAC ACAAACAAGC ATATCATTGC ACGAATTGAA CTATGAAAGT GGAAAAAAGG TTGACAGAGT
GTACCAGCTT CTGCATGTCT TGGAGTTCAG CAGTTCCCGC AAAAGAATGT CAGTGATAGT GAGGAATGAG GAAAATCAAT
TATTGCTTCT ATGCAAGGGT GCAGACAGTG TAATGTTTGA AAGGCTCTCA CAACATGGAA GACAATTTGA GGTTGAAACG
AGGGATCATA TCAAAAGGTA TGCCGAGGCT GGTTTAAGAA CCCTTGTAGT CACATACCGT GAACTTGATG AAGAAGAATA
TAAGTTATGG GATAAGGAGT TTTCAAAGGT CAAAACTTCT GTAACAGAAG ACCGAGATGC ACTTGTGGAT GCAGCTGCTG
ATAGGATGGA AAGAGATTTG ATACTTCTTG GTGCTACTGC AGTTGAGGAT AGACTGCAAA AGGGGGTTCC CGAGTGTATT
GAAAAGCTTG CACGCGCAAA AATCAAGTTA TGGGTATTGA CAGGAGACAA GATGGAAACT GCTGTCAACA TAGGGTATGC
TTGCAGTTTA CTTAGAAAAG ACATGAAACA GATAGTGATC ACTCTTGATT CCTCAGATAT CCTATACTTG GAAAAACAAG
GGGACAAGCA GGCTCTAGCT AAGGCTTCTC TTGAAAGCAT TAAGAAGCAA ATTGGAGAAG GAATCTCACA AATTAACTCT
GCAAAAGAGA GTTCTAATGC AAATAATGGA AGTTCTTCTG GGTTTGGCTT GATAATTGAT GGGAAGTCCT TGGATTATTC
TCTTAATAAG AATTTGGAAA GGTCCTTCTT TGAGCTTGCC ATTAATTGTG CTTCTGTCAT ATGTTGCCGA TCTTCACCCA
AACAAAAAGC TCGTGTTACA AAGTTGGTAA AATTGGGAAC AGGGAAGACA ACATTATCTA TCGGTGACGG GGCAAATGAT
GTTGGCATGC TTCAGGAGGC TGATATTGGA GTTGGTATCA GTGGTGCTGA AGGGATGCAG GCTGTAATGG CAAGTGATTT
TGCAATAGCT CAATTCCGGT TTCTAGAGCG TCTTTTGTTG GTACATGGTC ATTGGTGTTA TCGGCGTATA TCAATGATGA
TATGCTATTT TTTCTATAAA AACATTGCAT TTGGATTTAC CCTTTTTTGG TTTGAGGCGT ATGCTTCTTT CTCTGGTCAA
GCTGCTTACA ATGATTGGTA CATGTCATTT TACAATGTCT TCTTCACTTC ACTTCCAGTG ATCGCTCTAG GTGTTTTTGA
TCAGGATGTT TCTGCCAAAC TTTGCCTAAA GTATCCCTTT CTATATCTAG AGGGAGTAGA AGACACCCTG TTCAGCTGGC
CCCGAATTCT TGGGTGGATG TTGAATGGAG TCCTTAGTTC TTTAGTGATA TTCTTCTTAA CCACTAATTC TGTGTTGAAT
CAAGCCTTCA GAAGAGATGG TAAGGTGGTT GATTTTGAAA TACTTGGGGT GACAATGTAT ACATGTGTGG TGTGGACTGT
GAATTGCCAA ATGGCACTAT CCATAAATTA CTTTACTTGG ATACAACATT TTTTTATATG GGGCAGCATC GCTTTCTGGT
ATGTATTTGT GTTGGTCTAT GGTTACTTAT CTCCAGCAAT ATCCACAACA TCTTACAAGG TTTTTGTGGA AGCATGTGCT
CCCAGTGGTC TCTATTGGCT AGTAACCCTT TTGGTTGTTG TGTGTGTGCT GCTACCGTAT TTCTCCTATA GGTCTTTCCA
AAGTCGGTTT CTTCCAATGT ACCATGATAT TATACAGAGA AAACAAGTAG AAGGGATTGA AATTGGCTTA TCTGATGATG
ATTTACCTAA ACAGGTCCAA GGAAAACTAA TACATCTCAG AGAGAGATTG AAGCAAAGGG AGTTGTGA

>Vigan.11G015100.01
MPGGSSKRRI HFSKLYSFSC LKSPFRDGHS QIGQKGYSRV VYCNDPDNPE AVQLSYGGNY VSTTKYTAFN FIPKSLFEQF
RRVANIYFLI VACLSFSPLA PFTALSIVAP LLVVIGATMA KEAVEDWRRR KQDVEANNRK VQVYGRNYTF TETRWKKLRV
GDIIKVYKDE YFPADLLLLS SSYGDGVCYV ETMNLDGETN LKLKHALEVT VHLHDEKSLQ KFRAMVKCED PNENLYSFIG
TLQHDGKEYP LSLQQILLRD SKLKNTDFIY GIVIFTGHDT KVMQNSTDPP SKRSKIERKM DKIIYILFST LVLISFIGSV
FFGIETKKDI SGGRYRRWYL RPDNATVFYD PRRATLAAVL HFLTAIMLYG YLIPISLYVS IEIVKVLQSI FINQDQEMYH
EESDRPAHAR TSNLNEELGQ VDTILSDKTG TLTCNSMEFV KCSIGGIAYG RGMTEVEKAL ARRGKGGESD DDSGSSDFLG
QNNESVDSLH PVKGFNFSDE RLVNGQWVNE PYPDFIQKFF RVLAICHTAI PDEDKESGEI SYEAESPDEA AFVIAARELG
FEFFARTQTS ISLHELNYES GKKVDRVYQL LHVLEFSSSR KRMSVIVRNE ENQLLLLCKG ADSVMFERLS QHGRQFEVET
RDHIKRYAEA GLRTLVVTYR ELDEEEYKLW DKEFSKVKTS VTEDRDALVD AAADRMERDL ILLGATAVED RLQKGVPECI
EKLARAKIKL WVLTGDKMET AVNIGYACSL LRKDMKQIVI TLDSSDILYL EKQGDKQALA KASLESIKKQ IGEGISQINS
AKESSNANNG SSSGFGLIID GKSLDYSLNK NLERSFFELA INCASVICCR SSPKQKARVT KLVKLGTGKT TLSIGDGAND
VGMLQEADIG VGISGAEGMQ AVMASDFAIA QFRFLERLLL VHGHWCYRRI SMMICYFFYK NIAFGFTLFW FEAYASFSGQ
AAYNDWYMSF YNVFFTSLPV IALGVFDQDV SAKLCLKYPF LYLEGVEDTL FSWPRILGWM LNGVLSSLVI FFLTTNSVLN
QAFRRDGKVV DFEILGVTMY TCVVWTVNCQ MALSINYFTW IQHFFIWGSI AFWYVFVLVY GYLSPAISTT SYKVFVEACA
PSGLYWLVTL LVVVCVLLPY FSYRSFQSRF LPMYHDIIQR KQVEGIEIGL SDDDLPKQVQ GKLIHLRERL KQREL*