GBrowse Details

Vigan.11G079900.01

Basic Information:
Name: Vigan.11G079900.01
Multiple alignment
Variant Information
Position: Chr11:9445082..9448166 (- strand)
Length: 3085
Functional Information:
Description: Similar to protein. [F2D1Y1, Hordeum vulgare var. distichum]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:22.97,13.02,12.14,30.90,12.30,10.42,12.69,23.55
Automatic updates:
Name: NM_001248476 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306206 (LOC100306206), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr11:9445082..9445196 (- strand)
Length: 115
Type: three_prime_UTR
Position: Chr11:9445197..9445612 (- strand)
Length: 416
Type: CDS
Position: Chr11:9446003..9446083 (- strand)
Length: 81
Type: CDS
Position: Chr11:9447620..9447782 (- strand)
Length: 163
Type: CDS
Position: Chr11:9447783..9448166 (- strand)
Length: 384
Type: five_prime_UTR


>Vigan.11G079900.01
CAATTGTTGT AATAAGAGAG TCATCTTTCT CCAACTCCAA CAAACCATTC ATTTTCCCAT GGGACCCATC TCTCAAAATC
CACATCCTCG TTACATTATG CACATCATCC CTTACCATAA CATGACACTC TTGGTAGGAT CACATAATAC AACAAAATGT
TGTTCACATA ACTTCACTTT CAAGGCCAAT CCTCTTTAAC TTCCATTTTT CTCACAAACA CAACTTTTCC CTACCCTTTA
AGTATAACAC CAAAAACCCA CACATATTCA CACGCTTTAC ACATACTTCT TCCCTTTCTA TCTCTCAAGC AAGTGCAGAG
CATTAACTCT GGTTTTCTGT CACCCAGTGA CCGTGATGAT CATAAAGTTT TTGTCTTTTC AGTGATGGGT TCGTGTTCTT
CGGTCCCCAG AAAGGCTAAC GCAGACATGA AGCTCAAACT CTCGTTGGGT TCCAAATCTC AGAGGCTTGT CATTCCTCCA
TCACCCATTA AGGGACAGCC CCAAAATGGG GATTTTAAGT GGTCAACGAC CAACTTCACG GACCATGGCA GCAAAGAGGA
AGCATTTTTT GATTCCAAGC CCTGGTTAGA CTCAGACTGT GAAGATGATT TCTATAGTGT CAATGGTGAC TTCACACCAT
CTAGAGGGAC AACACCAGTT CACCACACTT TTGGGACCCC TTCTAGGAGT AGAATTCCTG GTTCTATTTC TGTTGCTGAA
ACATCCCCAG AGAAGAAAAA GAAACTGTTG GAACTGTTTC GTGAAAGTGT GAAAGATGAG AAAGTTGATG ATTGCCATGG
ACACAAAGCA GTGAAACCAA CCACACAACA TGTTATGGCA AAATCTGCAA ATTGCACTCC TTTTATCTCA GGGGCTAACT
CTACATGTAG TAGTGAAAGA ACCATGAGTG AGGATCGTGC TTCCATTAGA GAGAAACCAG TTAAGTCTTC GTCATGGTGC
ATTCCGAGCT TGTCCTCATG CAGAAGCTTT AGGGAGAGAA GTAGGAAGAC AAGTCCTGCA ATAGAATTAA ATGGAAAACA
TTGAGTTACC CTGCAATCTG ATGAACCAAA CTTTCTCTTA TGTGTTTAAT TTATACTCAC TATGTTAATG TAAAACAATT
GTACACCAAT ATTCAATAAA ATTTTGTCAT CTTATCTCC

>Vigan.11G079900.01
ATGGGTTCGT GTTCTTCGGT CCCCAGAAAG GCTAACGCAG ACATGAAGCT CAAACTCTCG TTGGGTTCCA AATCTCAGAG
GCTTGTCATT CCTCCATCAC CCATTAAGGG ACAGCCCCAA AATGGGGATT TTAAGTGGTC AACGACCAAC TTCACGGACC
ATGGCAGCAA AGAGGAAGCA TTTTTTGATT CCAAGCCCTG GTTAGACTCA GACTGTGAAG ATGATTTCTA TAGTGTCAAT
GGTGACTTCA CACCATCTAG AGGGACAACA CCAGTTCACC ACACTTTTGG GACCCCTTCT AGGAGTAGAA TTCCTGGTTC
TATTTCTGTT GCTGAAACAT CCCCAGAGAA GAAAAAGAAA CTGTTGGAAC TGTTTCGTGA AAGTGTGAAA GATGAGAAAG
TTGATGATTG CCATGGACAC AAAGCAGTGA AACCAACCAC ACAACATGTT ATGGCAAAAT CTGCAAATTG CACTCCTTTT
ATCTCAGGGG CTAACTCTAC ATGTAGTAGT GAAAGAACCA TGAGTGAGGA TCGTGCTTCC ATTAGAGAGA AACCAGTTAA
GTCTTCGTCA TGGTGCATTC CGAGCTTGTC CTCATGCAGA AGCTTTAGGG AGAGAAGTAG GAAGACAAGT CCTGCAATAG
AATTAAATGG AAAACATTGA 

>Vigan.11G079900.01
MGSCSSVPRK ANADMKLKLS LGSKSQRLVI PPSPIKGQPQ NGDFKWSTTN FTDHGSKEEA FFDSKPWLDS DCEDDFYSVN
GDFTPSRGTT PVHHTFGTPS RSRIPGSISV AETSPEKKKK LLELFRESVK DEKVDDCHGH KAVKPTTQHV MAKSANCTPF
ISGANSTCSS ERTMSEDRAS IREKPVKSSS WCIPSLSSCR SFRERSRKTS PAIELNGKH*