GBrowse Details

Vigan.11G101900.01

Basic Information:
Name: Vigan.11G101900.01
Multiple alignment
Variant Information
Position: Chr11:13633353..13636005 (+ strand)
Length: 2653
Functional Information:
Description: Hypothetical protein.
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:153.85,44.66,65.45,54.67,70.18,111.81,73.14,53.16
Automatic updates:
Name: NM_001250131 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100526997 (LOC100526997), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr11:13633353..13633425 (+ strand)
Length: 73
Type: five_prime_UTR
Position: Chr11:13633426..13633471 (+ strand)
Length: 46
Type: CDS
Position: Chr11:13633608..13633863 (+ strand)
Length: 256
Type: CDS
Position: Chr11:13635202..13635250 (+ strand)
Length: 49
Type: CDS
Position: Chr11:13635251..13636005 (+ strand)
Length: 755
Type: three_prime_UTR


>Vigan.11G101900.01
CAACTATTTC ATGTCTTCTT CTCTTTCTCA GAGACACAAC ATAACACCAC AGTGAGAAAA CAAAACAAGT GCAATGAGCA
ATTTCCAGAG AATATCGCAC GAATCCTACC CTCCACCAGG ATACGGATCT CCTTACCCTC CACCGCAACC GGGTTACCCA
TCGGCGCCGC CGCAAGAAGG CTACCCTCCG CCGCCTCCGC CGGGATACGG GGGTTATCCT CCGCCGCCGC ATCCGCCATA
TGACTCGTAC CAGGGGTATT TCGATAACGG GCGTCCTCCG CCACCTCCTC CGCCCCACTA CCACTACCAG CACCAGCATG
TGGCGCATCA TCACCATCAC GAGGAGCGTG AATGCTTTCC GTTCCTCCGA GGATGCTTGG CAGCGCTTTG CTGCTGTTGT
GTGCTAGAGG AGTGTTGCTT CTGATAATGA CATTACAAAT GCTGTTTCTT CAGTTTGGTG CACTTGGTTA TAGCTCTCTA
GACATGTATG TGGCTCAAAT TCTACATAAT AAGAGTGCGA GGTGGAAAGA CTTGGTCATT CTCGTAACAC TTTGGTCTTT
CCCCTCAACC AAATTTCTGG TCTGTGCATA GGTTCTGTGG TGTGGTCTAT GTGAATTGAT TTGTACGAAC ACTATATTGG
AAATCGTGAA ACGTCTCTTA TAACAGACAA TGAAATGGTT AAAATTGTGA CAAATTACTC GGCTTCTTTA CTCTTGAATA
TCATTTGCCT TTTTACTTAG TATGAGAATT TCTTTTTCTG TTTTTTTGTC CAGTGACTAG CTTTTTTAAA CATAATTTCC
AGAAGACGTT TTGAAGTTGA GGCAGCGAAA ACGACCTGAC CTGTGTAATT TTGATTATTA CAAAAGGTAC AAGATTCTCA
CGTAGTCTAC TTTATTAACA GACTTATTTG AAAGTGGGTG GCAAGGATTA TCTAAAGATG TGGATCTCAA TTGCATTTTT
TTTGCACGTT TGAGCTCAAT TTCCGGTAAA ATTCTCCTAC AGGTGTGATA AGGAGGTGCA ATTCTTTTTA TCATTTTTAT
ATTTTTTATT TATTTTAATC TTTGATTAAT ATAAATTCTT AAAATCTTAT CATATTTATT TGGTTTTTGC CTGAGAATTT
TAACGTTGGG TGTGTACGTC GATGAAAAGA CCAAAAAAAT ACACAAATGT CACATTTAT

>Vigan.11G101900.01
ATGAGCAATT TCCAGAGAAT ATCGCACGAA TCCTACCCTC CACCAGGATA CGGATCTCCT TACCCTCCAC CGCAACCGGG
TTACCCATCG GCGCCGCCGC AAGAAGGCTA CCCTCCGCCG CCTCCGCCGG GATACGGGGG TTATCCTCCG CCGCCGCATC
CGCCATATGA CTCGTACCAG GGGTATTTCG ATAACGGGCG TCCTCCGCCA CCTCCTCCGC CCCACTACCA CTACCAGCAC
CAGCATGTGG CGCATCATCA CCATCACGAG GAGCGTGAAT GCTTTCCGTT CCTCCGAGGA TGCTTGGCAG CGCTTTGCTG
CTGTTGTGTG CTAGAGGAGT GTTGCTTCTG A

>Vigan.11G101900.01
MSNFQRISHE SYPPPGYGSP YPPPQPGYPS APPQEGYPPP PPPGYGGYPP PPHPPYDSYQ GYFDNGRPPP PPPPHYHYQH
QHVAHHHHHE ERECFPFLRG CLAALCCCCV LEECCF*