GBrowse Details

Vigan.11G173000.01

Basic Information:
Name: Vigan.11G173000.01
Multiple alignment
Variant Information
Position: Chr11:28681353..28685076 (- strand)
Length: 3724
Functional Information:
Description: Similar to Uncharacterized protein. [I1L314, Glycine max]
GO: Biological Process: protein folding (GO:0006457)
Biological Process: response to stress (GO:0006950)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: unfolded protein binding (GO:0051082)
InterPro: Heat shock protein Hsp90 family (IPR001404)
Histidine kinase-like ATPase, ATP-binding domain (IPR003594)
Heat shock protein Hsp90, conserved site (IPR019805)
Ribosomal protein S5 domain 2-type fold (IPR020568)
Heat shock protein Hsp90, N-terminal (IPR020575)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:170.85,733.70,295.30,134.21,299.90,75.96,7.00,263.52
Arabidopsis thaliana homolog: AT2G04030.1, AT3G07770.1, AT4G24190.1, AT5G52640.1, AT5G56000.1, AT5G56010.1, AT5G56030.2
Automatic updates:
Name: KT726857 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max heat shock protein 90-1 mRNA, complete cds.
PubMed ID: 26714171 NCBI(pubmed)
Status: Known Variant
Name: NM_001317687 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max heat shock protein 83 (LOC100811234), mRNA.
PubMed ID: 26714171 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr11:28681353..28681845 (- strand)
Length: 493
Type: three_prime_UTR
Position: Chr11:28681846..28683399 (- strand)
Length: 1554
Type: CDS
Position: Chr11:28683515..28683795 (- strand)
Length: 281
Type: CDS
Position: Chr11:28683902..28684043 (- strand)
Length: 142
Type: CDS
Position: Chr11:28684656..28684778 (- strand)
Length: 123
Type: CDS
Position: Chr11:28684779..28685076 (- strand)
Length: 298
Type: five_prime_UTR


>Vigan.11G173000.01
TGGAAAGTTC CGGATACTTT GCTGCTAAAC TCAAAAAACA AAACGACAAC GTTTCTTCTG GTTCAGTCTA CTAATAAAAA
TGTCGAGAGG GAGGTAGAAC ACTCCAGAAC CTGTTTGTTT CACGCATGTT CTCATTTCTA TATAAACCTC TTCCATTTCT
TCTGCCTTCA ACGATTTATT TCTCTGCGAG TCGTTCTTAT AACTTGTGCA TTCTGCTCTG TGCAATTCGC TCATTTTCCT
TCTTGCGTTT CCTTCTCTGA TTAATCGGTG ATTCTTTGCG GTTATCATCT GATATTCAAT GGCGGACGCG GAAACCTTCG
CTTTCCAGGC TGAGATCAAC CAACTTCTGA GCCTCATCAT CAACACATTC TACAGCAACA AAGAGATTTT CTTGCGAGAA
CTCATCAGCA ACTCTTCTGA TGCTTTGGAT AAGATTCGAT TCGAGAGTTT AACCGATAAG AGCAAGCTCG ATGCTCAGCC
AGAACTCTTC ATTCGACTCG TGCCCGACAA GGCCAACAAC ACCCTTTCCA TTATTGACAG TGGCATTGGA ATGACTAAAG
CAGACTTGGT GAACAACCTG GGTACCATTG CGAGGTCTGG GACCAAGGAA TTCATGGAGG CGCTGCAGGC TGGTGCTGAT
GTAAGCATGA TTGGACAGTT CGGTGTGGGG TTCTACTCTG CATACCTTGT CGCGGAGAAA GTCATTGTTA CCACAAAGCA
TAATGACGAT GAACAGCACA TTTGGGAATC TCAGGCTGGT GGCTCTTTCA CTGTTACTAG GGACACTGAG GGCGAGCAAC
TCGGAAGAGG AACTAAGATT ACTCTCTTCC TCAAGGAAGA TCAGTTGGAG TACTTGGAGG AAAGGAGGAT CAAGGATCTT
GTAAAGAAGC ACTCTGAATT CATTAGCTAT CCTATCTACC TCTGGACGGA GAAGACAACC GAGAAAGAAA TTAGCGATGA
CGAAGATGAT GAGCCCAAGA AGGAGGAAGA AGGGGATATC GAGGATGTAG ACGAGGAAAA GGAGAAAGAT TCTAAGAAAA
AGAAGAAGAT CAAGGAGGTT TCTCACGAGT GGCAACTGAT CAACAAGCAG AAGCCAATTT GGCTGCGGAA GCCAGAAGAG
ATCACGAAAG ATGAGTACGC TTCTTTCTAC AAGAGCCTGA CCAACGACTG GGAGGAGCAC TTGGCTGTGA AGCATTTCTC
TGTGGAGGGC CAGCTTGAGT TCAAGGCCAT TCTCTTCGTT CCAAAGAGAG CACCCTTTGA TCTGTTTGAC ACGAGGAAAA
AGATGAACAA TATCAAGCTT TACGTCAGGA GGGTGTTCAT CATGGACAAC TGTGAAGAGC TCATTCCTGA GTACCTTGGA
TTTGTGAAAG GTGTTGTTGA CTCCGATGAC TTGCCCCTCA ACATCTCTCG TGAGATGTTG CAACAGAACA AGATCTTGAA
GGTGATCAGA AAGAATCTTG TGAAGAAGTG TATTGAGATG TTCAACGAAA TTGCAGAGAA CAAGGAAGAC TACAATAAGT
TCTATGATGC TTTTTCAAAG AACTTGAAAC TGGGTATCCA CGAGGATAGC CAGAACAGGT CCAAATTGGC TGACTTGCTG
AGGTACCACT CAACAAAAAG TGGCGATGAA ATGACAAGCT TGAAGGATTA CGTTACGAGA ATGAAGGAGG GACAGAAGGA
CATTTACTAT ATCACTGGAG AGAGCAAAAA GGCTGTGGAG AATTCACCCT TCTTGGAGAG ACTGAAGAAG AAGGGCTATG
AAGTTCTGTA CATGGTGGAT GCTATTGATG AGTATGCAGT CGGACAACTA AAGGAGTATG ATGGGAAGAA ATTGGTTTCA
GCTACAAAGG AGGGGTTGAA ACTGGATGAT GAAACTGAGG AAGAGAAGAA GAAGAAAGAA GAGAAGAAGA AATCCTTTGA
GGAGCTCTGC AAGGTCATCA AGGACATTCT GGGAGACAAA GTGGAGAAGG TTGTTGTCTC GGACAGGATT GTTGATTCCC
CTTGCTGTTT GGTTACTGGT GAGTATGGAT GGACCGCAAA CATGGAAAGA ATTATGAAGG CTCAGGCTCT GAGAGACAGC
AGCATGAGTG GCTACATGTC TAGCAAGAAG ACCATGGAAA TCAACCCTGA CAATGGTATA ATGGAGGAGT TGAGGAAGAG
AGCTGAAGCT GATAAGAATG ACAAGTCTGT GAAGGACCTT GTGTTGCTTC TGTTTGAGAC AGCCCTTTTG ACTTCAGGTT
TCAGCCTTGA TGATCCAAAC ACATTTGCTT CGAGGATTCA CAGGATGTTG AAGCTGGGTC TGAGCATTGA TGAAGATGAG
ACTGGTGGCG ATGATGTTGA CATGCCCCCA TTGGAAGAGG AAGGTGCTGA GGAGAGCAAG ATGGAAGAAG TGGACTAAAT
GCTTGTTTTT TATAATTTTA TGTTCAGTTA TGGTCTCGCG TCTGTTTGTC TGTCTGTCAA TGGTGGATGA CGAAATTTTT
CTGTGTCTAG CTTCATAGGT TTTTAGTTTT GTAATGAGAG AATGTGTCTG TTCTGTGATG CGAAAATGTG TCTGTCTGTT
GCATCTATCT TACTTTGTCA AATCTAAGAT ACATCAATTA AAGAAAGGAA CCGTGTTTTT GCTAACCTAT CTTACGCCAC
TTTTCTGCAT CACTGTCTCC TACTTGGTTT GCTTCCTTCA TTAAGTAATA CTATTCTACC TTTCTATGTT TAGGTTTGTG
GGTGAGTGGG GAGGGTATAG CATGCAGATT TGACAAACTT TTCTGTTATT TTTGTGTTGT TATCTGCAAC TGCTTGCTTT
CAATCCTTTG ATTTCTATCC TTTGAATGGA AATGTTTTAA CTTTAAACAA CATTGGACAC TCAAATACAT AAATCAATAA
TTGTGGAAAA G

>Vigan.11G173000.01
ATGGCGGACG CGGAAACCTT CGCTTTCCAG GCTGAGATCA ACCAACTTCT GAGCCTCATC ATCAACACAT TCTACAGCAA
CAAAGAGATT TTCTTGCGAG AACTCATCAG CAACTCTTCT GATGCTTTGG ATAAGATTCG ATTCGAGAGT TTAACCGATA
AGAGCAAGCT CGATGCTCAG CCAGAACTCT TCATTCGACT CGTGCCCGAC AAGGCCAACA ACACCCTTTC CATTATTGAC
AGTGGCATTG GAATGACTAA AGCAGACTTG GTGAACAACC TGGGTACCAT TGCGAGGTCT GGGACCAAGG AATTCATGGA
GGCGCTGCAG GCTGGTGCTG ATGTAAGCAT GATTGGACAG TTCGGTGTGG GGTTCTACTC TGCATACCTT GTCGCGGAGA
AAGTCATTGT TACCACAAAG CATAATGACG ATGAACAGCA CATTTGGGAA TCTCAGGCTG GTGGCTCTTT CACTGTTACT
AGGGACACTG AGGGCGAGCA ACTCGGAAGA GGAACTAAGA TTACTCTCTT CCTCAAGGAA GATCAGTTGG AGTACTTGGA
GGAAAGGAGG ATCAAGGATC TTGTAAAGAA GCACTCTGAA TTCATTAGCT ATCCTATCTA CCTCTGGACG GAGAAGACAA
CCGAGAAAGA AATTAGCGAT GACGAAGATG ATGAGCCCAA GAAGGAGGAA GAAGGGGATA TCGAGGATGT AGACGAGGAA
AAGGAGAAAG ATTCTAAGAA AAAGAAGAAG ATCAAGGAGG TTTCTCACGA GTGGCAACTG ATCAACAAGC AGAAGCCAAT
TTGGCTGCGG AAGCCAGAAG AGATCACGAA AGATGAGTAC GCTTCTTTCT ACAAGAGCCT GACCAACGAC TGGGAGGAGC
ACTTGGCTGT GAAGCATTTC TCTGTGGAGG GCCAGCTTGA GTTCAAGGCC ATTCTCTTCG TTCCAAAGAG AGCACCCTTT
GATCTGTTTG ACACGAGGAA AAAGATGAAC AATATCAAGC TTTACGTCAG GAGGGTGTTC ATCATGGACA ACTGTGAAGA
GCTCATTCCT GAGTACCTTG GATTTGTGAA AGGTGTTGTT GACTCCGATG ACTTGCCCCT CAACATCTCT CGTGAGATGT
TGCAACAGAA CAAGATCTTG AAGGTGATCA GAAAGAATCT TGTGAAGAAG TGTATTGAGA TGTTCAACGA AATTGCAGAG
AACAAGGAAG ACTACAATAA GTTCTATGAT GCTTTTTCAA AGAACTTGAA ACTGGGTATC CACGAGGATA GCCAGAACAG
GTCCAAATTG GCTGACTTGC TGAGGTACCA CTCAACAAAA AGTGGCGATG AAATGACAAG CTTGAAGGAT TACGTTACGA
GAATGAAGGA GGGACAGAAG GACATTTACT ATATCACTGG AGAGAGCAAA AAGGCTGTGG AGAATTCACC CTTCTTGGAG
AGACTGAAGA AGAAGGGCTA TGAAGTTCTG TACATGGTGG ATGCTATTGA TGAGTATGCA GTCGGACAAC TAAAGGAGTA
TGATGGGAAG AAATTGGTTT CAGCTACAAA GGAGGGGTTG AAACTGGATG ATGAAACTGA GGAAGAGAAG AAGAAGAAAG
AAGAGAAGAA GAAATCCTTT GAGGAGCTCT GCAAGGTCAT CAAGGACATT CTGGGAGACA AAGTGGAGAA GGTTGTTGTC
TCGGACAGGA TTGTTGATTC CCCTTGCTGT TTGGTTACTG GTGAGTATGG ATGGACCGCA AACATGGAAA GAATTATGAA
GGCTCAGGCT CTGAGAGACA GCAGCATGAG TGGCTACATG TCTAGCAAGA AGACCATGGA AATCAACCCT GACAATGGTA
TAATGGAGGA GTTGAGGAAG AGAGCTGAAG CTGATAAGAA TGACAAGTCT GTGAAGGACC TTGTGTTGCT TCTGTTTGAG
ACAGCCCTTT TGACTTCAGG TTTCAGCCTT GATGATCCAA ACACATTTGC TTCGAGGATT CACAGGATGT TGAAGCTGGG
TCTGAGCATT GATGAAGATG AGACTGGTGG CGATGATGTT GACATGCCCC CATTGGAAGA GGAAGGTGCT GAGGAGAGCA
AGATGGAAGA AGTGGACTAA 

>Vigan.11G173000.01
MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDAQ PELFIRLVPD KANNTLSIID
SGIGMTKADL VNNLGTIARS GTKEFMEALQ AGADVSMIGQ FGVGFYSAYL VAEKVIVTTK HNDDEQHIWE SQAGGSFTVT
RDTEGEQLGR GTKITLFLKE DQLEYLEERR IKDLVKKHSE FISYPIYLWT EKTTEKEISD DEDDEPKKEE EGDIEDVDEE
KEKDSKKKKK IKEVSHEWQL INKQKPIWLR KPEEITKDEY ASFYKSLTND WEEHLAVKHF SVEGQLEFKA ILFVPKRAPF
DLFDTRKKMN NIKLYVRRVF IMDNCEELIP EYLGFVKGVV DSDDLPLNIS REMLQQNKIL KVIRKNLVKK CIEMFNEIAE
NKEDYNKFYD AFSKNLKLGI HEDSQNRSKL ADLLRYHSTK SGDEMTSLKD YVTRMKEGQK DIYYITGESK KAVENSPFLE
RLKKKGYEVL YMVDAIDEYA VGQLKEYDGK KLVSATKEGL KLDDETEEEK KKKEEKKKSF EELCKVIKDI LGDKVEKVVV
SDRIVDSPCC LVTGEYGWTA NMERIMKAQA LRDSSMSGYM SSKKTMEINP DNGIMEELRK RAEADKNDKS VKDLVLLLFE
TALLTSGFSL DDPNTFASRI HRMLKLGLSI DEDETGGDDV DMPPLEEEGA EESKMEEVD*