GBrowse Details

Vigan.11G209900.01

Basic Information:
Name: Vigan.11G209900.01
Multiple alignment
Variant Information
Position: Chr11:33563249..33565996 (+ strand)
Length: 2748
Functional Information:
Description: Similar to Uncharacterized protein. [I1MN55, Glycine max]
InterPro: Nicotinamide N-methyltransferase-like (IPR019410)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:91.87,64.24,12.07,12.23,18.73,24.17,9.83,11.81
Arabidopsis thaliana homolog: AT1G73320.1
Automatic updates:
Name: BT090597 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-4L4 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr11:33563249..33563278 (+ strand)
Length: 30
Type: five_prime_UTR
Position: Chr11:33563279..33563518 (+ strand)
Length: 240
Type: CDS
Position: Chr11:33564124..33564266 (+ strand)
Length: 143
Type: CDS
Position: Chr11:33564761..33564945 (+ strand)
Length: 185
Type: CDS
Position: Chr11:33565507..33565620 (+ strand)
Length: 114
Type: CDS
Position: Chr11:33565700..33565827 (+ strand)
Length: 128
Type: CDS
Position: Chr11:33565828..33565996 (+ strand)
Length: 169
Type: three_prime_UTR


>Vigan.11G209900.01
TGAAACCGAA GCAGAGAGAG CGAGGACACC ATGGAAAAGG AAGAGGAAGA GGAAGCAGTG GCACCAATGG TGAAGTTGGG
ATCGTACGGT GGTGAAGTTC GGTTGATGGT TGGTGGAGAG GAATCCGCTG CGGAGGAGAC CATGCTTCTT TGGGGTATTC
AGCAACCCAC GCTTTCCAAA CCCAACGCTT TTGTCTCTCA ATCTTCTCTG CAACTCTCCC TCGACACTTG TGGCCACTCT
CTCTCTATTC TTCAATCCCC TTCTTCCTTG GGAAAACCTG GAGTGACGGG AGCGGTGATG TGGGACAGTG GAGTTGTATT
GGGGAAGTTT CTGGAGCATT CTGTTGACTC AGGGATGCTT GTCCTTCAGG GAAAGAAGAT TGTTGAGTTG GGATCTGGTT
GTGGATTGGT CGGTTGTATT GCAGCCCTCT TGGGTGGTGA AGTCGTTGTT ACTGATCTGC CAGATAGGCT GAGGCTACTG
AGAAAGAACA TTGAGACCAA TATGAAACAT GTTTCTCTAC GCGGTTCTAT AACAGCAACT GAACTCACAT GGGGAGAAGA
TCCTGACTCA GAACTCATTG ATCCCACACC TGATTTCGTG CTAGGATCTG ATGTGGTGTA CAGTGAGGGG GCAGTTGTGG
ATCTGCTAGA GACTCTTATG CAGCTCTCTG GACCAAATAC AACAATATTT TTGGCTGGAG AACTCAGAAA TGATGTCATT
CTTGAGTACT TCTTAGAAGC TGCAATGAAC AATTTCACTA TTGGCCGTGT GGATCAAACA CTGTGGCACC CTGATTATTG
CAGCAATCGT GTTGTTCTTT ATGTTCTAGT GAAGAAATAA TTGTTGAGAT TAATTTTTGA TTGTCTTGTG GAATGCTGAT
AGCATAATGT CCATAAAGTG CATTAAGAAT GAGAATTGTG AGTTTTTTTA TCACTATATT TTCTTTGTTA ACCAATGAGT
ATTTTGTTGT CTTTTATCTG GAAAATGGAA TTTGTATTCT GTTTGGTTA

>Vigan.11G209900.01
ATGGAAAAGG AAGAGGAAGA GGAAGCAGTG GCACCAATGG TGAAGTTGGG ATCGTACGGT GGTGAAGTTC GGTTGATGGT
TGGTGGAGAG GAATCCGCTG CGGAGGAGAC CATGCTTCTT TGGGGTATTC AGCAACCCAC GCTTTCCAAA CCCAACGCTT
TTGTCTCTCA ATCTTCTCTG CAACTCTCCC TCGACACTTG TGGCCACTCT CTCTCTATTC TTCAATCCCC TTCTTCCTTG
GGAAAACCTG GAGTGACGGG AGCGGTGATG TGGGACAGTG GAGTTGTATT GGGGAAGTTT CTGGAGCATT CTGTTGACTC
AGGGATGCTT GTCCTTCAGG GAAAGAAGAT TGTTGAGTTG GGATCTGGTT GTGGATTGGT CGGTTGTATT GCAGCCCTCT
TGGGTGGTGA AGTCGTTGTT ACTGATCTGC CAGATAGGCT GAGGCTACTG AGAAAGAACA TTGAGACCAA TATGAAACAT
GTTTCTCTAC GCGGTTCTAT AACAGCAACT GAACTCACAT GGGGAGAAGA TCCTGACTCA GAACTCATTG ATCCCACACC
TGATTTCGTG CTAGGATCTG ATGTGGTGTA CAGTGAGGGG GCAGTTGTGG ATCTGCTAGA GACTCTTATG CAGCTCTCTG
GACCAAATAC AACAATATTT TTGGCTGGAG AACTCAGAAA TGATGTCATT CTTGAGTACT TCTTAGAAGC TGCAATGAAC
AATTTCACTA TTGGCCGTGT GGATCAAACA CTGTGGCACC CTGATTATTG CAGCAATCGT GTTGTTCTTT ATGTTCTAGT
GAAGAAATAA 

>Vigan.11G209900.01
MEKEEEEEAV APMVKLGSYG GEVRLMVGGE ESAAEETMLL WGIQQPTLSK PNAFVSQSSL QLSLDTCGHS LSILQSPSSL
GKPGVTGAVM WDSGVVLGKF LEHSVDSGML VLQGKKIVEL GSGCGLVGCI AALLGGEVVV TDLPDRLRLL RKNIETNMKH
VSLRGSITAT ELTWGEDPDS ELIDPTPDFV LGSDVVYSEG AVVDLLETLM QLSGPNTTIF LAGELRNDVI LEYFLEAAMN
NFTIGRVDQT LWHPDYCSNR VVLYVLVKK*