GBrowse Details

Vigan.11G237700.01

Basic Information:
Name: Vigan.11G237700.01
Multiple alignment
Variant Information
Position: Chr11:36224125..36226118 (+ strand)
Length: 1994
Functional Information:
Description: Similar to Uncharacterized protein. [I1M2R0, Glycine max]
InterPro: NADH-ubiquinone oxidoreductase, subunit 10 (IPR019377)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:40.17,36.72,37.29,24.49,52.83,64.84,42.07,24.55
Arabidopsis thaliana homolog: AT3G18410.1
Automatic updates:
Name: NM_001249990 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100500620 (LOC100500620), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr11:36224125..36224312 (+ strand)
Length: 188
Type: five_prime_UTR
Position: Chr11:36224313..36224601 (+ strand)
Length: 289
Type: CDS
Position: Chr11:36224824..36224855 (+ strand)
Length: 32
Type: CDS
Position: Chr11:36224856..36226118 (+ strand)
Length: 1263
Type: three_prime_UTR


>Vigan.11G237700.01
CACAAGGCAT GCTAGCTCTT CAGCACTAAA GTTAGCAAAA TTATATATAT TGGGCCGATA ATAACGGGCC TTTGACTGCA
ATAAGCCCAA TCCGAAGGTA AGTGCAGGTA TAGAATCAGA ATTCGGAAGC ATCCGAGTTG AGCTGAGTTG TGTTGAGTTG
AGACAGGAGA GAGAACTCGT TGGTGAGAAT GGGAAGGAAG AAGGGGTATG TGGAGTTCGA CGAATCGCCG CCGGACGATT
TCGATCCGGC GAATCCGTAC AAGGACCCGG TGGCGATGCT GGAGATGAGG GAGTACATCG TTAGAGAGAA GTGGATTCAA
ATCGAGAAGG CCAAGATCAT CAGAGAGAAG CTACGCTGGT GCTACCGCAT CGAAGGCATC AACCACCTTC AGAAGTGCCG
CCATCTCGTC AACCAGTACC TCGAATCCAC ACGTGGTATC GGTTGGGGCA AGGACGGTCG CCATCCCTCT CTCCATGCTC
CTAAGGTTGA GCCGGTTGAG TCTGAATGAC TGTCTTGTGG ATAAATAAAA GGTACTTTCA AACATTATTT CTGTCATTTT
TCTTGTTTTA TATGAATTGT TATTGTTAAA TGAATCAATC GTCAAATGAG CTATTCATCT TTTGGGTTTT GGCTATTTTT
GGTTGAATGG AGATGGTGTA ATGCAAACCT CATCTTTGCC TAGGATTTAT TTGAATAAAC CTTTCTGGAA GCACGTTAGC
TAAAGAAAAC TAGAATGAAC AATGAGTAAG CTCTTTCGTA AATTAAACTT AGCTTGTGCG TAAATTGTTT TTTAACTCAT
CCAGTAGCTG ATTTAGTTTA CGAGGGAATT TATTTCCTTT TTGTTTCTTA TTTTCTTTTC AATTTTAATT CATTTTTAGT
TAGACCTCTT GAGTGATTTA TGTTCATGGT TTCTATTGGT TTTATATTGG CTTTTGATGG CCTAATGCAA CCATGAATTT
GGAACGACAA TGAGATCATT GGTGGAGTTA GTTCTTAAGT GAATCCCACC GGAAAAAAAA TGGACTTACA AGTGAAATAA
GTACTTGGTG ACTAGTGAAA CAAGTGAAGT ATTTATATTT CTGCTGACTC TTCATGCTTA TCATGTCTAA CGAATTTGAG
CTCCATGTCA AAAGTTAGGA TATCCGACAA GTTGTTGTTG AGCATTCTGA ACTTTGCTGA GGGTAATAAA TCAGCATTAA
CTCTTTTGAC GATAGATACT AGGGCCTAAA TTAAGTGACA TTTGACAGCT TTTCAGAGAA GAATTGCTGT CAACATTGAT
GTTGTCACCA TGAACTTCTT GGTAGAGATC CCTCTCATTT CTGGTTATAA TGACGCCGAT GTAGATGACT GGCGACACAG
TAATAAAGCG AATTTCTCTA ATAAATTCAA GAAAGTGATG AGTGCTTAAA TCGAGTTGTT GAAATGGTTA AAAGTTCTAT
TTGCATGAGA TATAGCTGGT CTTCCCTCTC CCCCATCTTA CCAACTTTTG TTCCACTAAG TGATGATTGA TGGCTCATTT
GCATTGCTAT TAAATTTGTA AGAACTAATC ATTGGAGTTA TTTGATGTAT TTGGTCGGAG GAACATTTGT TTGGTTAATT
TGATAAGTTC AATATCTTTG GGTGAGTTAT TGATAACATC TGAATCTTAA TTCGAAATGT CACGTACACT ATTTTTGTTG
TAATATTTCT TTATTTTAAA ATAGTTTTCA TTGATGCAAT CATTTTGTCT ATCAATGAAA GTAAGTTTTG TTTCTCTTAC
AGGGAAAGAT TG

>Vigan.11G237700.01
ATGGGAAGGA AGAAGGGGTA TGTGGAGTTC GACGAATCGC CGCCGGACGA TTTCGATCCG GCGAATCCGT ACAAGGACCC
GGTGGCGATG CTGGAGATGA GGGAGTACAT CGTTAGAGAG AAGTGGATTC AAATCGAGAA GGCCAAGATC ATCAGAGAGA
AGCTACGCTG GTGCTACCGC ATCGAAGGCA TCAACCACCT TCAGAAGTGC CGCCATCTCG TCAACCAGTA CCTCGAATCC
ACACGTGGTA TCGGTTGGGG CAAGGACGGT CGCCATCCCT CTCTCCATGC TCCTAAGGTT GAGCCGGTTG AGTCTGAATG
A

>Vigan.11G237700.01
MGRKKGYVEF DESPPDDFDP ANPYKDPVAM LEMREYIVRE KWIQIEKAKI IREKLRWCYR IEGINHLQKC RHLVNQYLES
TRGIGWGKDG RHPSLHAPKV EPVESE*