GBrowse Details

Vigan.11G241500.01

Basic Information:
Name: Vigan.11G241500.01
Multiple alignment
Variant Information
Position: Chr11:36542383..36548287 (+ strand)
Length: 5905
Functional Information:
Description: Similar to Uncharacterized protein. [I1N095, Glycine max]
GO: Molecular Function: hydrolase activity (GO:0016787)
InterPro: NUDIX hydrolase domain (IPR000086)
NUDIX hydrolase domain-like (IPR015797)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:3.91,3.31,5.42,13.97,4.52,6.92,3.02,4.20
Arabidopsis thaliana homolog: AT5G19460.1
Structure :
Position: Chr11:36542383..36542403 (+ strand)
Length: 21
Type: five_prime_UTR
Position: Chr11:36542404..36542721 (+ strand)
Length: 318
Type: CDS
Position: Chr11:36543258..36543322 (+ strand)
Length: 65
Type: CDS
Position: Chr11:36543530..36543716 (+ strand)
Length: 187
Type: CDS
Position: Chr11:36543812..36543892 (+ strand)
Length: 81
Type: CDS
Position: Chr11:36544450..36544575 (+ strand)
Length: 126
Type: CDS
Position: Chr11:36544798..36544877 (+ strand)
Length: 80
Type: CDS
Position: Chr11:36545142..36545257 (+ strand)
Length: 116
Type: CDS
Position: Chr11:36545350..36545470 (+ strand)
Length: 121
Type: CDS
Position: Chr11:36545900..36545969 (+ strand)
Length: 70
Type: CDS
Position: Chr11:36545970..36548287 (+ strand)
Length: 2318
Type: three_prime_UTR


>Vigan.11G241500.01
AGTGTCCACC CTCCTTTGTT CATGACACGA CACAGATACC TTAACTTTGT TCTGTTGAAC AAACCAGAGA CAGCAATGGG
AACGGTTTGC TGCATCAGCA AATTTGCTAC TTTGAACTAC GTCAGATCAC GACCCTTCTC TTCATTCCTT CCCTCTCACC
CTTTTCCCTC CACAACTTCC ACCAACTTCA GCTTGGCCTC GTCTTTTTCT TCTTCTGTCA CATTATCGTT CACATGGAAC
GATGCCATTG GCATATCTGA ATCTCAAACC GACACACAAG ACCGCTCTCG CTATCTCCAA GGCTTCTTCA ACAAAGTTCA
ACTATGCAAT CGTGGTTCTG AAAAACAATC TGAGTTCCTT CCGTTTGTGG TCGAGGACCA CATTGTTGGA TTCATTCACA
ATGGATTTGT GGAGCATTTG AGGGGCTTTG GCGATGTGTT TGTCTTCCCC AAAGAAAAAT TCAATGGAGG CCCCAATGGT
GACTTTGTTT CTTTGCATCC AATGCTGAAG ACAGCTGATG AAAGAACCAG TGCAGTTGGA TATGTAGTAC AGCAGTTGGG
AGAGGAGCGG ATTCCAGGTA TACGGAATGA GCTTTACCCT GTGACATCAT CCTTTGGTGC ACCCATTTTC TTTTCATTGG
AGCGTGCAGC AGCTCCTTAT TTCGGCATAA AGGCTTATGG AGTCCATATG AATGGCTATG TTGAGGTGGA TGGGCAGAAG
CACCTTTGGA TAGGAAAGAG AAGTGACACA AAACAGACAT ATCCTGGAAT GCTTGATCAT CTAGTTGCAG GAGGACTGCC
ACACGGCATT GACTGTCAGG AGAATGTCAT AAAGGAATGT GAAGAGGAAG CAGGAATACC TAGATCTCTC TCTGTCAAAG
CCATACCTGT AGGGGCTGTT TCATATATGG ACATTGATGG GTATAGATAC AAGAGAGATG TCCTATTCTG TTATGATCTA
AAACTTCCAA AAGATTTCAT ACCTAATAAT GAAGATGGAG AAGTTGATAG CTTCAAGTTG ATCCCTGTTA GGCAAGTTGC
AGAAGTCATA CGTAAGACAC AGTTTTTCAA GACAAATTGC TCGCTCGTAA TCATTGACTT CCTGTTTCGA CACGGATACA
TCACTCCTGA ATATCATGGA TATTTGGATC TCCTCCGTAG CTTAAGAATA GGAGATTGTT CCTGACACAA AGCATCGTGA
CTATTCACTG TGTCATGCAT TGATGTTTGT TGTTCAAACT TCATAATGGT TAATTCAATA TTATGTTAGA AACTGTGGGA
TTGGACTTTT CCAGTATGCA GTCTTCAACT TGGATAATCT TACTGTACTT CTGATTTTTG CAATAATTGG TGAGTAAGCA
TTAAATATGT TCAAAGAATT ATTCCATGCA AAATCTGACA TTCAGATTTC ATAAAGTCAA AATTGCGGCT GTTTGTTTTC
CTTGTTGCAA CCACTTAAAA TGAAGAAAGA AAAATGGTCC AGATCCATGT CTCGAAGATG AACTTGACCA ATGGATAAAA
TAAGATTCGT GTCAACACAC TTTATTTGCC AGCATACCTA TATCAGAAAG AGATTCAAAA AAAGTACATT TCCACAAAGC
TGATTCACAT TATTATTTCA AGAGTACAAT GAATTAAGTA ACACGTACCA CACTTTGTCC AGATCAAAAC ACCATATAAA
CCTCACACAA ACTACACGTG TGTTTGGAAC CACGTCTGGT GTGCGTTCAC TTCAACACAA AATCTAGTCA CTTCAGTATT
AGCGTGGGTT GTGAACGTAG TTCCAACCAA ACATGTACAT CAACCTATAT AAATGAAATC AGAAACAAGT ATAACTAAGA
TGACAAAATG ATGGAGATTG AGAATTACAA GCCAATAACA CCCTTCAGCA CATCAACTAG CTGAGGGCAT GCAGTCATCT
GAGGAAAATG CCCTTTAGCT TCCAAAGCCT CCAATGTAAC TTTTCCTTTA ATTTTTCTCT GCATGTATAG TGCTACATTG
AATGGAACAA TAATGTCACT AGTGGTCTGA ATGATGGTGC ATGGAGTTTC AATTTTCTCA AGTATATCTC TGTAATCACT
GTAGAACACA GTCTTGGCTA AGGATACTGC CACATCAGCT CTCATTCTTC CCAGGAACTC TCTGAATTTG TTAACAGATG
GCTCATCATT TGGGTCCACT GCCAGTAAGG AGAAGGCAAT AACCCAGTTG TCATAGTTGG ACTCCATGTT CTGCAAAAAC
TGCTCAACAT CTGAGCTAGT AAAGCCACCC TCATAGTCAT CAGTATTAAG ATACCTGTAT GTCATAGCAA GAAGTTAGAG
GGACTTACCT TAAGATGTCT TGGGTTTGAG TTCGTCAAAA AGATGATTTT TTCAATCTTA GCAATGCTAT TAAAAGCTTA
AAATACTGTT ATAACTCTTA AAAACATATA TAATGAAAGT TTATTAAAGA TAAAATCAAA TTGCATACAA ATCTCATCTT
TGTAGGTTAA AGTTCACTTT TTTAATCGGA AGAAAGATTT TTCCTTCTTT TGTTTGGTAT ATTTTTAAAG GTGAAAAGAG
AAAAATCGAT ATTTTAGGAC CTGTTTGGTT TAGTATACGT ATTTTGGTCT GACAGTTCTA AGATTGATAT GAACACACAT
CTTAATCACT TCACCTCTTT AAATTGTACA TATCTTTCTA CCTTTTATTT TATATAACTC TTTACTTTAG AGGAATCAAA
ATTAAAAATT GTCAAAATGG TGAGAGAATA TCTTTTTAAC TGAAATTGAC ATGGCCGGCA AATCGGTGGT TCAAATTTGA
AAAGGGCTAA GGAGCAATCT TCCAAATCTA ATTTTATAAG ATGTGGAGAT AATTGAAGTC AGCAAAGTGG GAAGAGAAAG
TGAAGTTTTG TCTTTTTGAG TTAGTTCAGA GCTTTCTGTT TATTCTATTA ACAATTTTTA TGGATGAAAA CAAGGTTGTT
TCATCAAACA CACCACGCTG AAAAAGGTGA TACCACAAGA TTACAAAAAA AATTCGAATC CCTCCCCCAA TTCCGTATAC
ACCACATGTT TGGTTGGTTC ATCTTTTTTT TTTCTATAAT CCTGTAACTG GTTGGCTCTT TTTAATACTG AAATTTAAAT
TATTGTTTAT TTGGGCTATG ATATATCCTT ATCTTTTACA CAGTCGAAGA TTGCAAGTTG TCCAAATTAT TATGTGTGTT
GTTCTGTGAG TACTGCTGAT TATTGTTTTT TTTTTTCTCA CAAATATAGA TTCCTACAGA CAGTGGAAAG TCCTAGAAAA
ATTCTGGAAC CAAACCATTA AACTTTGTGT AGGGTTCCCT TAAGACAAAG AGACAGCAGA AAAAAACAGC ACATATGACT
CAAGCCTAAC TCAAACAACA TAGTGAGCAT TGGATTATGA GACAAATACT AAGAAAAATT GACAGTGGGG AATAAAAGAG
AGGAAAGTTA TATTTGTAAA ATAAATTTTA AACAATGAAG GAGAGATGAG AAAGAAAAAT GAG

>Vigan.11G241500.01
ATGACACGAC ACAGATACCT TAACTTTGTT CTGTTGAACA AACCAGAGAC AGCAATGGGA ACGGTTTGCT GCATCAGCAA
ATTTGCTACT TTGAACTACG TCAGATCACG ACCCTTCTCT TCATTCCTTC CCTCTCACCC TTTTCCCTCC ACAACTTCCA
CCAACTTCAG CTTGGCCTCG TCTTTTTCTT CTTCTGTCAC ATTATCGTTC ACATGGAACG ATGCCATTGG CATATCTGAA
TCTCAAACCG ACACACAAGA CCGCTCTCGC TATCTCCAAG GCTTCTTCAA CAAAGTTCAA CTATGCAATC GTGGTTCTGA
AAAACAATCT GAGTTCCTTC CGTTTGTGGT CGAGGACCAC ATTGTTGGAT TCATTCACAA TGGATTTGTG GAGCATTTGA
GGGGCTTTGG CGATGTGTTT GTCTTCCCCA AAGAAAAATT CAATGGAGGC CCCAATGGTG ACTTTGTTTC TTTGCATCCA
ATGCTGAAGA CAGCTGATGA AAGAACCAGT GCAGTTGGAT ATGTAGTACA GCAGTTGGGA GAGGAGCGGA TTCCAGGTAT
ACGGAATGAG CTTTACCCTG TGACATCATC CTTTGGTGCA CCCATTTTCT TTTCATTGGA GCGTGCAGCA GCTCCTTATT
TCGGCATAAA GGCTTATGGA GTCCATATGA ATGGCTATGT TGAGGTGGAT GGGCAGAAGC ACCTTTGGAT AGGAAAGAGA
AGTGACACAA AACAGACATA TCCTGGAATG CTTGATCATC TAGTTGCAGG AGGACTGCCA CACGGCATTG ACTGTCAGGA
GAATGTCATA AAGGAATGTG AAGAGGAAGC AGGAATACCT AGATCTCTCT CTGTCAAAGC CATACCTGTA GGGGCTGTTT
CATATATGGA CATTGATGGG TATAGATACA AGAGAGATGT CCTATTCTGT TATGATCTAA AACTTCCAAA AGATTTCATA
CCTAATAATG AAGATGGAGA AGTTGATAGC TTCAAGTTGA TCCCTGTTAG GCAAGTTGCA GAAGTCATAC GTAAGACACA
GTTTTTCAAG ACAAATTGCT CGCTCGTAAT CATTGACTTC CTGTTTCGAC ACGGATACAT CACTCCTGAA TATCATGGAT
ATTTGGATCT CCTCCGTAGC TTAAGAATAG GAGATTGTTC CTGA

>Vigan.11G241500.01
MTRHRYLNFV LLNKPETAMG TVCCISKFAT LNYVRSRPFS SFLPSHPFPS TTSTNFSLAS SFSSSVTLSF TWNDAIGISE
SQTDTQDRSR YLQGFFNKVQ LCNRGSEKQS EFLPFVVEDH IVGFIHNGFV EHLRGFGDVF VFPKEKFNGG PNGDFVSLHP
MLKTADERTS AVGYVVQQLG EERIPGIRNE LYPVTSSFGA PIFFSLERAA APYFGIKAYG VHMNGYVEVD GQKHLWIGKR
SDTKQTYPGM LDHLVAGGLP HGIDCQENVI KECEEEAGIP RSLSVKAIPV GAVSYMDIDG YRYKRDVLFC YDLKLPKDFI
PNNEDGEVDS FKLIPVRQVA EVIRKTQFFK TNCSLVIIDF LFRHGYITPE YHGYLDLLRS LRIGDCS*