GBrowse Details

Vigan.11G249700.01

Basic Information:
Name: Vigan.11G249700.01
Multiple alignment
Variant Information
Position: Chr11:37224475..37228037 (+ strand)
Length: 3563
Functional Information:
Description: Similar to methyltransferase-like protein 5-like. [XP_004513013.1, Cicer arietinum]
GO: Biological Process: methylation (GO:0032259)
Molecular Function: nucleic acid binding (GO:0003676)
Molecular Function: methyltransferase activity (GO:0008168)
InterPro: DNA methylase, N-6 adenine-specific, conserved site (IPR002052)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:26.88,13.72,15.56,19.47,18.69,18.80,21.26,16.04
Arabidopsis thaliana homolog: AT4G28830.1
Structure :
Position: Chr11:37224475..37224526 (+ strand)
Length: 52
Type: five_prime_UTR
Position: Chr11:37224527..37224586 (+ strand)
Length: 60
Type: CDS
Position: Chr11:37224710..37224766 (+ strand)
Length: 57
Type: CDS
Position: Chr11:37225263..37225360 (+ strand)
Length: 98
Type: CDS
Position: Chr11:37225559..37225628 (+ strand)
Length: 70
Type: CDS
Position: Chr11:37225870..37225918 (+ strand)
Length: 49
Type: CDS
Position: Chr11:37226461..37226549 (+ strand)
Length: 89
Type: CDS
Position: Chr11:37226636..37226683 (+ strand)
Length: 48
Type: CDS
Position: Chr11:37227279..37227338 (+ strand)
Length: 60
Type: CDS
Position: Chr11:37227571..37227693 (+ strand)
Length: 123
Type: CDS
Position: Chr11:37227694..37228037 (+ strand)
Length: 344
Type: three_prime_UTR


>Vigan.11G249700.01
TAGAAAATTT AGGCAGAAGA AAAAATGGCA GTGAAAGTTT GAATCGGAAA AGATGAAGCT GAAGCAGTTG GAAGGCCTTC
TTGGTGGTCT CCAGCAGTTC CCTCAACCCA AGGTGGAGCT TGAACAGTAT CCAACGGGAC CCCATATTGC TTCCCGAATG
CTTTTCACTG CAGAGAATTC TTTTGGGGAT GTGAGCAACA AAGTAGTGGC TGACTTTGGA TGCGGCTGTG GTACGTTAGG
TGTTGCAGCT GCCCTTTTGA GTGCAGAACA TGTTCTCAGC ATTGACATTG ATCCAGAATC TCTTGAAGTA GCTTCTGTTA
ATGCAGAGGA ACTTGAGCTT GATATCGATT TTATTCGGTC TAATGTCTTG GATTTGGGAT GGAGAGGTTC AATTGTTGAT
ACAGTTATAA TGAATCCTCC ATTTGGTACT CGTAAAAAAG GTGCAGATTT GGATTTTCTC TCTGTTGCTT TGAAGGTTGC
TTCTCAAGCT GTTTATTCCT TGCATAAGAC TTCAACAAGA GATCATGTGA AACGAACAGC ACTAAGGGAT TTCAATGCTA
GCAGTGCTGA AGTTATATGT GAGCTTCGGT TTGATGTACC AAAAATGTAC AAATTTCATA AGAAGAAGGA AGTAGATATT
GCTGTGGACC TCTGGCGGTT TGTTCCAGCA AGTCATCAAA GAAGTACTTC ATGCAGACAA GGATAGTGTG TATTGGAATG
TATGATAAGA TTGCAAGAAA AAGGAAAATT TTGGGTACCT ATAGAAAGAA ACCTTCTCTA TGTGACAAGC ACTTGCACGT
AAAATTGGTC GATGGCACTT CTTTTAGTTG TGTGTATCTA TAAATTCAAT GGTCGAGAAG ATACAGTGCT CTTTCTGCTT
GTTCGTACAG GGATCTTCCA GAAGTTGGTT ATATCATGAA ACTTAGTTAT ATCAGACAAT ATTATGCTCC TTCTATTTCA
TATGGATTAT CAATTTAGCG TTGAACTTTT CTCGTAAGTA CTATTGTTTT GGAGTATTTA CTTTTAATCT GAAAAAAAGA
AAACTTAAGT 

>Vigan.11G249700.01
ATGAAGCTGA AGCAGTTGGA AGGCCTTCTT GGTGGTCTCC AGCAGTTCCC TCAACCCAAG GTGGAGCTTG AACAGTATCC
AACGGGACCC CATATTGCTT CCCGAATGCT TTTCACTGCA GAGAATTCTT TTGGGGATGT GAGCAACAAA GTAGTGGCTG
ACTTTGGATG CGGCTGTGGT ACGTTAGGTG TTGCAGCTGC CCTTTTGAGT GCAGAACATG TTCTCAGCAT TGACATTGAT
CCAGAATCTC TTGAAGTAGC TTCTGTTAAT GCAGAGGAAC TTGAGCTTGA TATCGATTTT ATTCGGTCTA ATGTCTTGGA
TTTGGGATGG AGAGGTTCAA TTGTTGATAC AGTTATAATG AATCCTCCAT TTGGTACTCG TAAAAAAGGT GCAGATTTGG
ATTTTCTCTC TGTTGCTTTG AAGGTTGCTT CTCAAGCTGT TTATTCCTTG CATAAGACTT CAACAAGAGA TCATGTGAAA
CGAACAGCAC TAAGGGATTT CAATGCTAGC AGTGCTGAAG TTATATGTGA GCTTCGGTTT GATGTACCAA AAATGTACAA
ATTTCATAAG AAGAAGGAAG TAGATATTGC TGTGGACCTC TGGCGGTTTG TTCCAGCAAG TCATCAAAGA AGTACTTCAT
GCAGACAAGG ATAG

>Vigan.11G249700.01
MKLKQLEGLL GGLQQFPQPK VELEQYPTGP HIASRMLFTA ENSFGDVSNK VVADFGCGCG TLGVAAALLS AEHVLSIDID
PESLEVASVN AEELELDIDF IRSNVLDLGW RGSIVDTVIM NPPFGTRKKG ADLDFLSVAL KVASQAVYSL HKTSTRDHVK
RTALRDFNAS SAEVICELRF DVPKMYKFHK KKEVDIAVDL WRFVPASHQR STSCRQG*